Pseudomonas simiae MEB105, RU03_RS22460

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas simiae strain MEB105 contig_27, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCCTTGATTTACTGGCCTTCAGTAGATTGGCATGCACCTTGCTATAACCCAGTTAACGAACAGCAGGTCAGCCCTTAAAGGTTTCCACCATGAGCATCAG CTTCGATAAAGCGCTCGGTATCCACGAACAAGCCCTGGGCTTCCGCGCCCAGCGTGCCGAAGTCCTGGCCAACAACATTGCCAACGCCGACACCCCGAAC TACAAGGCTCGGGATTTGGACTTCTCCGCCGTGCTCGCTGCACAGCAGGACAAGACCAAGAACGGCACCTTCGCCTTGAACATGACCAACAGCCGTCATA TCGAAGCGCAAGGCCTGAGCAATGGTGACGAGTCGCTGCTGTATCGCACGCCGATGCAGCCGTCGATCGACCAGAACACCGTCGACGCGCAGCTGGAGCA ATCGGCCTACGCCGAGAACTCGGTGAACTTCCAGGCCAGCTTCACCCTGCTTAACAGCAAATTCAAAGGGCTGATGTCAGCCCTGCGTGGAGAGTAAGCC
DNA Sequence for Gene
>RU03_RS22460
ATGTCCCTGTCCAGTGTTTTCAATATTGCCGGCAGTGGCATGAGCGCGCAGACCACGCGCTTGAACACCGTCGCCAGTAACATCGCCAACGCCGAGACCG TGTCTTCGAGCATTGACCAGACTTACCGCGCCCGTCACCCGGTGTTCGCCACCATGTTCCAGGGCGGCCAGGCAGGTGGCAGTGATTCGTTGTTCCAGGA CCAGGGGGCCGCAGGCTCCGGCGTGCAAGTGCTGGGTGTGGTCGAAGACCAGAGCAACCTTGAAGCCCGCTACGAACCCAACCATCCCGCCGCGAACGAA AAGGGTTATGTCTATTACCCGAACGTCAACGTGGTCGAGGAAATGGCCGACATGATTTCCGCCAGCCGCTCGTTCCAGACCAATGCGGAAATGATGAACA CTGCCAAAACCATGATGCAGAAGGTCCTGACCCTGGGTCAGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TAAGGGGCGCCAAATAATGGCCATCGTTGATACGAGTAACAACACGCCAGTCCAGGACCTTTTCAATTCCAAGGTCAAAACTGCCCAGGACAACAGCAGC GTCACTGATGCTGCCAATAAGGCCACGGGCAAACAATCGCTGGGCAAGGATGCGTTCTTGCAGCTGTTGGTCACCCAACTGAAAAACCAGAACCCGCTGT CGCCGCAAGACAACGGCGCGTTCGTGGCCCAACTGGCGCAGTTCAGCAGCCTGGAAGGCATCAACACCCTGAATGATTCGGTGAATGCGATCTCCAGCAA CTTCAGCTCGTCGCAAGCGCTGCAGGCGTCGTCGCTGGTCGGGCGCTCGATCATCATCCAGACCGACAAGGCCATGGTTGATACCAGCAAGAGCATGACC GGGTCGGTGGATGTCACAGCGGCGACCGGCAATGTCTCCGTCAAGATCACTGACAAAGACGGCAATGTGGTGCGCACCATCGAAATGGGGGCCCAGAGCG
Amino Acid Sequence
>flagellar basal body rod protein FlgC
MSLSSVFNIAGSGMSAQTTRLNTVASNIANAETVSSSIDQTYRARHPVFATMFQGGQAGGSDSLFQDQGAAGSGVQVLGVVEDQSNLEARYEPNHPAANE KGYVYYPNVNVVEEMADMISASRSFQTNAEMMNTAKTMMQKVLTLGQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site