Pseudomonas simiae MEB105, RU03_RS18150
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas simiae strain MEB105 contig_25, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CAAGCACCCGGGCCAGCTTTCCGGCGGCCAGCAACAACGTGTGGCAATTGCCCGCGCCCTGGCCATGGACCCGATCGTCATGCTGTTCGACGAACCGACC TCGGCCCTCGATCCGGAAATGGTCAACGAAGTACTCGACGTAATGGTGCAGCTGGCCCAAGAAGGCATGACCATGATGTGCGTGACCCACGAAATGGGCT TCGCCCGCAAAGTGGCCGACCGCGTGATCTTCATGGACGCCGGCAAGATCATCGAAGACTGCCCGAAAGAAGAGTTTTTCGGCGACATCAGCGCCCGCTC CGAACGCGCGCAGCACTTCCTTGAGAAAATCCTGCAGCACTAAAAAAGCCACAGCTTGCTCCTCCTGTAGGAGCGAGCTTGCTCGCGAAAAAGGCAACGA TGACGCGCACATCCTGGATGAACGCGGTGCCCTTGGTTTTTTCGCGAGCAAGCTCGCTCCTACAGGAAGGGTGAGCGGTAGCTGACCCAAGGCATCTGTG
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| DNA Sequence for Gene |
>RU03_RS18150
ATGAAATGCGACCCCAACCAATTTCGCGCCGCACCGCCATCACTTGCCGTGAAACCACGCCTGATCCGCCAACTGTTCCTGCCGCCGTTGATCATCGCCC TGATGATCGGCCTGGGTTATATCGGCTTCTGGGTCAGCGAGTACTACGGCATCCGCACCCTCAGCGACACTGGCGAACGCCAGCTGGAGCTGCATGCCCG CACCGTCGAAAGCGAACTGAGCAAATACACCTACTTGCCCAGCCTGTTGGAACTGGAGTCCAGCGTCTCCGCGCTGCTGGCCGACCCCAATCAGGAAACC CGCAAGACCGTCAACGATTACCTCGAAGGCCTGAACCGACGCAGTCGCAGCCGGGCCATCTACGTGATGGACACCACCGGCCGCGTGCTGGCCACCAGTA ACTGGCGTGATGCCGACAGTTACCAGGGTGAAGACCTGTCCTTCCGCGCCTATTTCCAGAACGCCGTGCGTGGCCAGCCTGGCCGTTTCTACGGCATCGG CAGCACCAACGGCGAACCCGGCTACTACTTGGCCCACGGCCTGGAAGAGCATGGCAAGATCATCGGCGTCGCCGTGGTCAAGGTGCGCCTCGAAGCCCTG GAGGAACGCTGGCAACGCGCGCGCCTCGAAGCCTTTGTGAGCGACGAGAACGGCATCATCATCCTCTCCAGCGACCCGGCCCGCCGCCTCAAGGCTGTGC GTCCGCTGAGCGATGACGTCAAGGAACGCCTGGCCCACAGCCTGCAATACTACTGGGCGACGTTGAATGAGCTGGAACCCCTGGCCCGCGAGCGCCTCAA CGAAGGTACCGAGAAACTGACCTTCCCGGCCAACAGCGAAGTGGTGAACGACGAGCACGAAGTCAGCTACCTGGCGCAAACCCGCCCGCTGAATGACACA CCGTGGAGTTTCACCCTGCTCACCCCGCTCAACGACCTGCGCCGTGCGGCGATCAACCAAGGCATTTTGGTGGCCGTCGCGTTTGGCCTGGTGGCGTTTT TGCTGATTGCCTGGAACGAGCGACGCAAAGTCATCGCCACCCGCCTCGCCGCGCGGGAAGCCCTGCAGGAAGCCAACAGCCAGCTGGAACGACGGATTGC CGAACGCACCGCCGACCTGCGTGCCAGCAACGAACGGCTCAAGGGCCAGATCCGCGAACGGCGCCAGGCCGAGGAGACGCTGCGCCGCGCCCAGGATGAA CTGGTGCAGGCCGGCAAGCTGGCGGCCATCGGCCAGATGTCGACCAGCATCGCCCACGAATTGAACCAGCCCCTGGCAGCCCTGCGCACCCTGTCCGGCA ACACCGTACGCTTCCTGGAGCGCGGCGCCCTGGACACCGCCAGTGCCAACCTCAAAACCATCAACGAACTGATCGACCGCATGGGTCGCATCACCGCCAG CCTGCGCTCCTTCGCCCGGCGCGGCGATGACCAGGGCGAAGCCAGCCTGGCCAAAGCGGTAGACGCGGCTTTCCAAGTACTCGGCGCACGCCTGGACAGC CTACCGCTGACCCTGCACCGCGACTTTTCCCACGCGCAATTGCAAATCGACCAGACGCGCCTGGAGCAGATCCTGGTCAACCTGATCGGCAATGCCCTCG ACGCTATGCAGGCTCAGCCGGCTCCCGAGCTGTGGCTGGAAGGCAGCAGCGCCGACGGCAAATACCGCCTGCACGTGCGCGACAATGGCCACGGTATCGA CCCGGAGGCGCGCAAGCATTTGTTTGAACCGTTCTTCACCACCAAGCCCGGCGAGCAAGGCCTGGGCCTGGGGCTGACCCTCTCCGCCAGCCTGGCGGCG GCCACCGGCGGCAACCTTGCCGTGGAACACCCGGCCAGTGGTGGAACGGCCTTTGTCTTGTGCCTGCCGTTGGCGGGCGCTCAAAAAGCTGAGTCGACAT GA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ATACAGACGCTAAAGCCATTAAAGACGAGCTCACGGTACTGATCGTCGAAGACGACCCCCATGTACTGCTCGGCTGCCAGCAGGCCCTGGCCCTGGAAGA CATTCCCAGTGTCGGCGTAGGCAGCGCTGAAGAGGCGTTGAAGCGCATCGGCGAGAACTTCGCCGGCATTGTGATCAGCGACATCCGCTTGCCCGGCATT GACGGCCTGGAGCTGCTCACCCGTCTCAAGGCTTTGGATAAAAGCTTGCCGGTGGTGCTGATCACCGGGCACGGCGACATCTCCATGGCCGTCGGCGCCA TGCGCAACGGCGCCTATGACTTCATGGAAAAACCCTTCTCCCCCGAACGCCTGGTGGACGTGGCCCGCCGCGCCCTTGAACAGCGCGGACTGGCGAGGGA AGTCTGGTCGCTGCGCCGCCAATTGGCTGAGCGCGATTCGCTGGAAGGCCGCATCATCGGCCGCTCACCGGCCATGCAGAACCTGCGCGAGCTGATCGCC
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| Amino Acid Sequence |
>histidine kinase
MKCDPNQFRAAPPSLAVKPRLIRQLFLPPLIIALMIGLGYIGFWVSEYYGIRTLSDTGERQLELHARTVESELSKYTYLPSLLELESSVSALLADPNQET RKTVNDYLEGLNRRSRSRAIYVMDTTGRVLATSNWRDADSYQGEDLSFRAYFQNAVRGQPGRFYGIGSTNGEPGYYLAHGLEEHGKIIGVAVVKVRLEAL EERWQRARLEAFVSDENGIIILSSDPARRLKAVRPLSDDVKERLAHSLQYYWATLNELEPLARERLNEGTEKLTFPANSEVVNDEHEVSYLAQTRPLNDT PWSFTLLTPLNDLRRAAINQGILVAVAFGLVAFLLIAWNERRKVIATRLAAREALQEANSQLERRIAERTADLRASNERLKGQIRERRQAEETLRRAQDE LVQAGKLAAIGQMSTSIAHELNQPLAALRTLSGNTVRFLERGALDTASANLKTINELIDRMGRITASLRSFARRGDDQGEASLAKAVDAAFQVLGARLDS LPLTLHRDFSHAQLQIDQTRLEQILVNLIGNALDAMQAQPAPELWLEGSSADGKYRLHVRDNGHGIDPEARKHLFEPFFTTKPGEQGLGLGLTLSASLAA ATGGNLAVEHPASGGTAFVLCLPLAGAQKAEST
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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