Pseudomonas simiae MEB105, RU03_RS17450

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas simiae strain MEB105 contig_25, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGCAACAACCTGCGCCAGAACTCCCGTGCCCTGGGCCTGGGTATGCGTCGGTTGGGCCTGTTCACCAGCATCGTGTTGTTCGACCAGCGCGTCTCGATGT GGACCTCCCTGCTCGGCCTGACCGTGGCAATTATCGCCACCTTCAAGTACGGCGGCGCGTTCATCCTCGCGTACCTGCTGTGGATCGGCATCACCCGTCT GATTCTGACCCTGCTGCTGTCGTGCTCCGGCCACAAGATCGGCCCGGCGTACCCGGTGATTCTCTATTACAACCAGATCATGGGCGCGCTGGTGAAGATC TACGTGTTCTTCCGCCTTGATCAACAGTCCTGGACCCGCCAGGACACCAAACTGACCCGCGATTTGGCCAGCTTTCAACGTTGGTTCAACACCTGGTCGT CTCGGACCATGACCTTCTCCGCCGGCAGCATTTTCGTCGCCGTGTTGCTGATGATGGTCTGACCCTGCCAAGCCTGAATTAACCAAGGAATTACACCGTC
DNA Sequence for Gene
>RU03_RS17450
ATGAACAGCCAAGTAAACGCCAACGTTGTCCACGAATCCGAAGCCCAGCGCCAACATGCCCGGGTAAAAATCCCGGCCAAGCTGCGCTTCTTCAACACCG ACCGCACCCAGACCGAAGCACGGGTCATCGACCTGTCGGCTGGCGGCCTGGCGTTCACCGCCACGCAGCCGCTGACCGTGGGGGAAGTGCACAAGGGTCG TCTGCAATTCGTCATCGACAACCTCGGCCTGGCCATGGATGTGGAGTTGCAGATCCGCTCCTACGATCGCCAGAGCGGCCGTACCGGTTGCCAGTTCCAG AACCTCGACGCTCAGGACATTTCCACCCTGCGCCACCTGATCACCTCGCACCTGTCCGGTGACATCGTGACCATGGGCGACGTGCTGGCGACCCTGCAAC GCGACAACTTCACCAAGGCGCGCAAGGTCAAGGACGGCGGCAGCAACATGAGCGCCTTCGGCCGCCTGCGCGCCGTGACGTTCAGCCTGGCGATCTTCCT AGTCGGCCTCGCCGCGTTCGGTTTTGTCTTCAAGTCGATCTACGGCATGTACTTCGTCAGCCACGCCCAGGCAGGCCTGGTCAACGTACCCGGCATGAAC GTGACCATGCCGCGCGACGGCACTGTGCAAAGCCTGCTCAAGGGTGACGGGATCGCTGCCAAAGGCGCGCCATTGGCGACCTTCAGCACCAGCATGCTGG ACGTGCTCAAGGGTCACCTGGACGAAGACCAACTGCAACCGGCCAAGGTTGAAGAGCTGTTCGGCAAGCAAATGACCGGCACCCTGACGTCGCCCTGCGA TTGCGTGGTGGCCCAGCAAATGGTCGCGGACGGTCAGTACGCCAACAAAGGTGATGTGATCTTCCAACTGGTGCCGCGCGGCAGCCTCGCCAATGTTGAA GCGCGCTTCACCTATCGCCAGTTCGCCGACGTTCGCCCAGGTACACCGGTGAGCTTCCAGGTGGCCGACGAAGAACAGATCCGTACCGGCACCATCGTCA GCAGCACCAGCCTGAACAGCGCCGACCTGTCCTCCGACATTCGCGTGCAGATCAAGCCTGACGCACCGCTGGACAGCACCTACGCCGGTCGCCCGGTGGA AGTGACCAGCGACCGTGGCCCGTCCCTGAACTGGCTGATCGATAAAGCCATGGCCCACGGTCTGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCGAGGACATGCCTGTGACGACTTTCTCAAAAACACCGCAATCCCTGTGGGAGCGGGCTTGCTCGCGAAAGCAGTGTGTCAGCCAGCACATGCATCAACT GACAGGGCCCCTTCGCGAACAAGCCCGCTCCCACATGGGTACTGCGGCGTTGCTAGCTGTTGCAGTCAGCCTCGCCGGTTGCGCCGGCCTGCCCGACCAA CGCCTGGCTAACGAAGCGTTGAAACGTGGCGACACCGTCACCGCCCAGCAGAATTACCAGCAACTGGCAGACCTGGGTTACAGCGAGGCCCAGGTGGGCC TGGCTGACATCCAGGTCGGCACCCGCGATCCGGCGCAAATCAAACAGGCTGAAGCCACCTACCGCGCCGCGGCGGACACTTCGCCCCGCGCCCAGGCCCG TCTCGGTCGCCTGCTGGTGGCCAAGCCTGGCAGCACCGAAGCCGAACACCATGAAGCCGAAGGCCTGCTGAAAAAAGCCTTTGCCAATGGCGAAGGCAAC
Amino Acid Sequence
>hemolysin D
MNSQVNANVVHESEAQRQHARVKIPAKLRFFNTDRTQTEARVIDLSAGGLAFTATQPLTVGEVHKGRLQFVIDNLGLAMDVELQIRSYDRQSGRTGCQFQ NLDAQDISTLRHLITSHLSGDIVTMGDVLATLQRDNFTKARKVKDGGSNMSAFGRLRAVTFSLAIFLVGLAAFGFVFKSIYGMYFVSHAQAGLVNVPGMN VTMPRDGTVQSLLKGDGIAAKGAPLATFSTSMLDVLKGHLDEDQLQPAKVEELFGKQMTGTLTSPCDCVVAQQMVADGQYANKGDVIFQLVPRGSLANVE ARFTYRQFADVRPGTPVSFQVADEEQIRTGTIVSSTSLNSADLSSDIRVQIKPDAPLDSTYAGRPVEVTSDRGPSLNWLIDKAMAHGL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site