Pseudomonas simiae MEB105, RU03_RS15245

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas simiae strain MEB105 contig_20, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCTGATTGCCAAGGCCAACAAGGTCGATGTGCATGACCTGCAGCGCTGGAACAAGCTCAACGGCCAGGCCCTCAAGGTCGGCCAGACCCTGGTGATGCAG GACACGCGCAAGCGGGTGGCCAAGGCCGACAGCAAGAAGCCGGTGCAATACAAGGTCAAGAAAGGCGACTCGCTGTACATCGTCGCCAAGCGCTTCAACG TTGAGATGCAACATCTCAAGCGTTGGAACCCACGTACTGGCCAGGCGTTGAAGCCGGGGCAGATGCTGGTGGTTTCCGGACCAAGATAAGCCCTCCCAAC AGCACCGGGGAGCAAATGTGGGAGCGGGCTTGCTCGCGAAGGCAGTGTGTCATTCGACATATTCGGTGACTGACACTCCGTCTTCGCGAGCAAGCCCGCT CCCACATGGGCGCTCCATCATCCGACCGGCTTTTTCCAACCGGAACAAGCTGTTACTGTACCGATCATAAAGCCCAAGCCGCCCGGATCGGATCTCTGAC
DNA Sequence for Gene
>RU03_RS15245
TTGAAGCGTCCCCTCCTTCTACTAATAAGTCTGGCCTTGAGCTTTGGTGCGAACGCGGCGATTACCGAGAGCCACGGTTATACGCAGTTCGGCGTGCTCA AGTACCCGGCCAAATTCACCCACTTCGATTGGGTAAACCCTGCAGCGCCGAAAGGCGGGACATTGCGGGTCATGGCCTTTGGCACTTTCGACACCCTCAA CCCCTACACTTTCAAGGGCTCAAGCCCGGTTTCCACCCCCAATTTCCTGCAATACGGCGTCAATGAGCTGAACGAACCGTTGATGGTCGGCACCGGCCTG TACGCGCCCTCCGGCGACGAGCCGACCTCCAGTTACGGGCTGATCGCACAGTCGGTGGAGTACAGCGAGGACCGCAGTTGGGTGGTGTTCAACCTGCGCC CGGAAGCGCGCTTCCACGATGGCAAGCCGATCACCGCCTATGACGTGGCGTTTTCCTATCGCACCCTGCTGACCGAAGGCCACCCGCAATACCGTACCAA CCTGCAGGAGGTGGCACGGGTGGATATCCTCAACCGGCATCGCATTCGCTTTGTGTTCAAGCGCGCCGGCAACCCGCTGCTGATCCTGCGCCTGGGCGAA TTGCCTGTCCTGCCCCAGCACTATTGGAAAAACCGCGACTTCAAGGCGACGACTTTCGAACCGCCGCTGGGCAGCGGGCCGTACCGCATCAGCAAGGTCA CGCCTGGCCGGCAACTGGTGTTCGAACGGGTGAAGAACTACTGGGGCAAGGACCTGCCGGTCAATCGGGGTTTCTATAACTATGACAAGGTCGAAGTGGA GTTCTACCGCGACAGCGACGTGGCCTTCGAAGCGTTCAAGGCCGGTGAGTTCGATATCTACATTGAGCACCAGGCCAAGAACTGGGCCAATGGCTACAAC TTCCCGGCGGTTAATCGGGGCGACGTGATCAAGGCGCAGATCGCGCACCAGATTCCGACCCAGAGCCAGGGTCTGTTCATGAACAGTCGGCGACCGATCT TCAGCCAGGCCAAGGTGCGCGAAGCCCTGGGGCTGATGTTCGACTTCGAATGGACCAACCGCACCCTGTTCAGCAGCGCCTACAAACGCACCTTGAGCTA CTACCCCAACAGCGAATTCTCGGCCTCCGGCGTTCCAACCGGGCATGAATGGCTGATGCTCTCGCCGTACCGCGATCAATTGCCGGCCAGCCTGTTTACC CAGCCGTTCAGCCTGCCCCAGACCGACGGCCGTGGCATCCCCCGCGAAACCATGCGCCGCGCCCTGGCCCTGCTCGGCGACGCCGGCTGGAAACTCTCCG GCCAACGCCTGCTCAACAAGGACGGTCAGCCGCTGCGATTCGAAATACTGCTGGTCAATCCGAACCTGGAGCGCATCCTGCAGCCCTATGTCGAAAACCT GATCAGCATCGGCATCGACGCGCGCCTGCGCACCGTCGATCGCGCCCAGTACAAGCAGCGCCTGGATCAATTCGACTTCGACATGATCCTGATCACCCTT AACCAGACCTTGAGCCCGGGCCTTGAGCAGTGGCAGTACTTCCACTCAAGCCAGGCGGCGATCAAGGGCAGCAAGAACTACGCAGGCATCGCCAACCCGA TTGTCGATCACCTGCTGGAACAACTGCTGGCCGCCAAGACCCGCGAAGAGCAACTGGCCGCCGGCCGTGCCCTGGACCGGGTGCTGCTGTGGCAGCATTA CAGTATTCCCAACTGGTACCTCAACTATCATCGCTTGGCGTACCGCAACCGGTTCGCCTTTGTCACCACGCCGCCCTATAGCCTGGGCCTGAGCGCGTGG TGGCTGAAAGCTTCGGAGAAAGCCCAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGTATTTGCGTACTGCACTGCTCGGCGGCCTGCTGCTGTGCACCGCGGCCCAAGCCGCCCCGCAACATGCGTTGACGCTCTACAACGAACCCCCAAAATA CCCCGCCGACTTCAAGCACTTCGACTATGTGAATCCGGACGCGCCCAAAGGCGGCACCTTCCGCGAGTCGGCCATGGGCGGCTTCGACAGCCTCAACCCC TACATCAGCAAGGGCGTGCCAGCCGACAACCTCGGCCTGATTTACGACACCCTGGCCATGCAAAGCCTGGACGAGCCCATCACCGAATACGGCCTGGTCG CCGGCAAGATCGAAAAAGCCCCGGACAACAGCTGGGTACGCTTCTATTTGCGCCCCGAAGCACGCTTTCACGATGGCCACCCGATCCGCGCCGAAGACGT GGTGTTTACCTTCCAGGAACTGATCAAGGAAGGCTCGCCGATCTATCGCACTTACTACGCCGACGTCGACGAAGTGGTCGCCGAAGACCCGCTGAAGGTG
Amino Acid Sequence
>ABC transporter substrate-binding protein
MKRPLLLLISLALSFGANAAITESHGYTQFGVLKYPAKFTHFDWVNPAAPKGGTLRVMAFGTFDTLNPYTFKGSSPVSTPNFLQYGVNELNEPLMVGTGL YAPSGDEPTSSYGLIAQSVEYSEDRSWVVFNLRPEARFHDGKPITAYDVAFSYRTLLTEGHPQYRTNLQEVARVDILNRHRIRFVFKRAGNPLLILRLGE LPVLPQHYWKNRDFKATTFEPPLGSGPYRISKVTPGRQLVFERVKNYWGKDLPVNRGFYNYDKVEVEFYRDSDVAFEAFKAGEFDIYIEHQAKNWANGYN FPAVNRGDVIKAQIAHQIPTQSQGLFMNSRRPIFSQAKVREALGLMFDFEWTNRTLFSSAYKRTLSYYPNSEFSASGVPTGHEWLMLSPYRDQLPASLFT QPFSLPQTDGRGIPRETMRRALALLGDAGWKLSGQRLLNKDGQPLRFEILLVNPNLERILQPYVENLISIGIDARLRTVDRAQYKQRLDQFDFDMILITL NQTLSPGLEQWQYFHSSQAAIKGSKNYAGIANPIVDHLLEQLLAAKTREEQLAAGRALDRVLLWQHYSIPNWYLNYHRLAYRNRFAFVTTPPYSLGLSAW WLKASEKAQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site