Pseudomonas simiae MEB105, RU03_RS12565

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas simiae strain MEB105 contig_17, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GACCCGAACCTGTCAGTGATCCTGGAAACCCTGACCGCCCTGGGCACCCAGCAGATCATGGGGCAGGCCTACCTGCCGGCGATCAAGGACGGCGACAAGC GCATCCTGATGATCGACGGCGAGCCGGTGGATTACTGCCTGGCGCGCATCCCGGCGGCCGGCGAGACCCGCGGCAACCTGGCGGCCGGTGGTCGTGGTGA AGCACGCCCTCTGTCGGACAAGGACCGTTGGATTGCAGCCCAGGTCGGCCCGACCTTGCGTGAAAAGGGCTTGCTGTTTGTCGGCCTGGACGTGATCGGT GAGCACCTGACTGAAATCAACGTCACCAGCCCGACCTGCATCCGCGAGATCGACAATGCGTTTGGCACCAACATCGGCGAAATGCTGATGGCCGCCATTG AGCGCAAGCTGCAAGCCAAGTGATATAGAACAGCCGGACACGCACCAACATTGCGCTATCATGCCCCACCTGTGAAACGCGCGATGTTGGTTTTTTTGTC
DNA Sequence for Gene
>RU03_RS12565
ATGACACTCCCGTCCGAGCTGCCCCCCGAACTCTCCCACAGCGGCGTGCGCCCGGCTGATCGGCTCGGTTTTACCCTGTTTCTGGCAGCGTTGATTCATC TGGCCCTGATCCTCGGCGTGGGTTTCACCATGGTCGAGCCCAAACAGATCAGCAAAACCCTGGAAATCACCCTCGCCACGTTCAAGAGCGAAAAAAAGCC CGAGAAGGCTGACTTCCTCGCCCAAGACAACCAGCAGGGCAGCGGCACCCTCGATAAAAAGGCGGTACCCAAGACCACCGAGGTCGCACCGTTCCAGGAC AACAAGGTGAATAAAGTCACCCCGCCGCCGGTGCCCAAGCCGGAGGTCAAGCAGGCCGCGCCCAAGGCTGCGGTGACCACCGTCGCGCCCAAGCCGCAGA AAGCCCCGACCCAGCGCGAAAAGACCAAGACCGAACCCACGCCCGAGCCCGTAAAGCCGGCACCGACATTCGACAGCTCGACGTTGTCCGACGAGATCTC CAGCCTCGAAGCCGAACTGGCCAATGAACAACAGCTGTACGCCAAGCGCCCGCGCATCTACCGGTTGAACGCGGCCTCGACCATGCGCGACAAAGGCGCC TGGTATAAGGACGAATGGCGCAAGAAGGTCGAGCGCATCGGCAACCTCAACTACCCGGAAGAAGCCCGGCGTCAGCAGATTTACGGCAATTTGCGTCTAT TGGTTTCAATCAACCGTGACGGCACGTTATATGAAGTGCAGGTGCTGGAATCGTCCGGCCAACCGCTGCTGGACCAGGCCGCCCAGCGCATCGTGCGCCT GGCCGCGCCCTTCGCGCCGTTCAGCGGCGATTTGAACGACGTCGACCGCCTGGAGATTATCCGCACGTGGAAGTTCGCCAAGGGCGATCGGTTGTCGAGC AATTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGACAATTGCCACCTGCGGCCCATCACCAGCTTGTCAGTTCGCCCCTCCACCGCCACACTATCGAACATGAAAAACGTCAGCCCGACCTACCTCAAGCAT CAATTCCTGATCGCCATGCCCCATATGGCCGACCCGAACTTTGCGCAGACCTTGACCTACATCGTCGAGCACACGGCCAATGGTGCCATGGGGCTGGTGG TCAACCGCCCGCAGGAGCTGAACCTGGCGGACATCCTTGAACAACTGCGCCCGGAAGTCGACACACCGGCCCGTTGCCAGGGTGTGCCGATCTACATCGG CGGGCCAGTGCAGACCGATCGTGGTTTTGTGCTGCACCCGACGGGGCCGAAGTTCCAGGCCACGGTCGATCTGGACGGTGTGTCGCTGTCCACCTCCCAG GACGTGTTATTCGCCATCGCGGACGGTGTAGGCCCCGAGCAGAGTGTGATCACCCTCGGATACGCGGGCTGGGAAGCCGGCCAATTGGAAGCCGAGCTGG
Amino Acid Sequence
>cell envelope biogenesis protein TonB
MTLPSELPPELSHSGVRPADRLGFTLFLAALIHLALILGVGFTMVEPKQISKTLEITLATFKSEKKPEKADFLAQDNQQGSGTLDKKAVPKTTEVAPFQD NKVNKVTPPPVPKPEVKQAAPKAAVTTVAPKPQKAPTQREKTKTEPTPEPVKPAPTFDSSTLSDEISSLEAELANEQQLYAKRPRIYRLNAASTMRDKGA WYKDEWRKKVERIGNLNYPEEARRQQIYGNLRLLVSINRDGTLYEVQVLESSGQPLLDQAAQRIVRLAAPFAPFSGDLNDVDRLEIIRTWKFAKGDRLSS N
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site