Pseudomonas simiae MEB105, RU03_RS09500

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0009279 cell outer membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02802
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0051301 cell division
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_02204
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR01021
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF103088 OmpA-like IPR036737 OmpA-like domain superfamily 59 165 3.4E-34
MobiDBLite mobidb-lite consensus disorder prediction - - 147 166 -
FunFam G3DSA:3.30.1330.60:FF:000001 Peptidoglycan-associated lipoprotein - - 46 166 1.5E-79
Hamap MF_02204 Peptidoglycan-associated lipoprotein [pal]. IPR039001 Peptidoglycan-associated lipoprotein 2 166 29.612709
PANTHER PTHR30329 STATOR ELEMENT OF FLAGELLAR MOTOR COMPLEX - - 65 164 6.7E-24
CDD cd07185 OmpA_C-like IPR006665 OmpA-like domain 62 165 2.60531E-42
NCBIfam TIGR02802 JCVI: peptidoglycan-associated lipoprotein Pal IPR014169 Peptidoglycan-associated lipoprotein, C-terminal 65 164 3.0E-41
Gene3D G3DSA:3.30.1330.60 - IPR036737 OmpA-like domain superfamily 46 166 7.7E-34
PRINTS PR01021 OMPA domain signature IPR006664 Outer membrane protein, bacterial 67 89 6.2E-20
PRINTS PR01021 OMPA domain signature IPR006664 Outer membrane protein, bacterial 96 111 6.2E-20
Pfam PF00691 OmpA family IPR006665 OmpA-like domain 66 160 2.0E-22
PRINTS PR01021 OMPA domain signature IPR006664 Outer membrane protein, bacterial 111 127 6.2E-20

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.