Pseudomonas simiae MEB105, RU03_RS01730

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas simiae strain MEB105 contig_1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GACCGAAAAAGGCATCGTCGAACGGCCGGACACCGCCAAGCTGGCCAAGTTGATGTGCCGTAAACGCCTGCATTGAGGGCGTTGGCGGCTGTCCGATTGC ATTCGCGAGCAAGCCCGCTCCCACATTTTGAATGTGTTCACCACTCAAATGTGGGCGCGGGCTTGCTCGCGAAGGGGTCTATAAGTCAAGAAAACCTTCG GATCTGCCTTCAAAAAATAGCACGACCCTGCCTCTGAGCCCCTCTCGTCGCCCTCAAGCCTGTCATCCGTCAACTTACTATGCTCCATGCGCATCAGGGG GATAGGTGCGTGGCGGCGATTGTGATAACATCCGGCGGTTTCCAGGGTCGCCCCGAGGGGTGGCCTATAACGTGCAGATCCGTGTCATAACTCGTTGATT TGTCGTAAGTCGTTGTCAGGCACTCTGCCGGCAGCGGCGAGCTTCGTTCGTCCCATATGGATGTGACGAGGTTTCACCCGAAAAAGGAATCAGGCTTCTC
DNA Sequence for Gene
>RU03_RS01730
ATGGGCGAACTGGCCAAAGAAATCCTCCCGGTCAATATCGAAGACGAGCTGAAACAGTCCTACCTCGACTACGCGATGAGCGTAATTGTCGGTCGGGCAC TGCCTGATGCGCGCGATGGCTTGAAGCCCGTGCACCGGCGTGTGCTGTTCGCGATGAGCGAGCTGGGTAACGACTGGAACAAGCCGTACAAGAAATCTGC CCGTGTTGTCGGTGACGTGATCGGTAAGTATCACCCTCACGGCGACACTGCGGTGTACGACACCATCGTTCGGATGGCCCAGCCGTTTTCCCTGCGCTAC CTGCTGGTAGACGGCCAGGGCAACTTCGGTTCGGTCGACGGCGACAACGCCGCGGCCATGCGATACACCGAAGTGCGCATGACCAAGCTGGCGCATGAGC TGCTGGCCGACCTGCATAAAGAAACCGTGGACTGGGTGCCGAACTACGACGGCACCGAAATGATCCCGGCGGTCATGCCGACCAAGATCCCCAACCTGCT GGTCAACGGTTCCAGCGGTATCGCCGTGGGCATGGCCACCAACATCCCGCCGCACAACCTCGGTGAAGTCATCGACGGTTGCCTGGCCCTCATCGACAAC CCGGAGCTGACCGTCGATGAGCTGATGCAATACATCCCCGGCCCGGACTTCCCGACTGCCGCGATCATCAACGGTCGCGCCGGCATCATCGAAGCCTACC GCACCGGTCGCGGCCGCATTTACATGCGCGCCCGCTCGATCATCGAAGACATCGACAAGGTCGGTGGCCGCCAGCAGATCGTTATCACCGAACTGCCGTA CCAGCTGAACAAAGCGCGCCTGATCGAGAAGATCGCCGAGCTGGTCAAAGAGAAGAAGCTCGAAGGCATCACCGAACTGCGCGACGAGTCCGACAAAGAC GGTATGCGCGTGGTGATCGAACTGCGTCGTGGCGAAGTGCCTGAGGTGATCCTCAACAACCTCTATGCCCAGACCCAGCTGCAAAGCGTGTTTGGTATCA ACGTGGTTGCGTTGATCGACGGCCGCCCGCGCATCCTGAACCTCAAGGACCTGCTGGAAGCCTTCGTGCGTCACCGTCGCGAAGTGGTCACACGCCGCAC CGTGTTCGAACTGCGCAAGGCCCGCGAGCGCGGCCACATCCTGGAAGGCCAGGCAGTTGCGCTGTCGAACATCGACCCGGTAATCGCCCTGATCAAGGCC TCGCCAACCCCGTCGGAAGCCAAGGAAGCGTTGATCAGCACGCCTTGGGAATCCAGCGCCGTGGTGGCCATGGTTGAACGTGCCGGCGCCGACTCGTGCC GTCCGGAGACCCTGGACCCGCAATACGGTCTGCGCGAAGGCAAGTACTTCCTGTCGCCGGAACAGGCCCAGGCCATCCTGGAGTTGCGCCTGCACCGCCT GACCGGTCTGGAGCACGAGAAGCTGCTGGCCGAGTACCAGGAGATCCTCAACCAGATCGGCGAGTTGATCCGCATCCTCAGCAGCGCCGTGCGCCTGATG GAAGTGATCCGCGAAGAACTGGAAGTGATCCGCGCCGAATACGGCGACGTGCGCCGTACCGAAATCCTCGATGCGCGCCTCGACCTGACCCTGGGTGACA TGATCCCGGAAGAAGAGCGTGTGGTGACCATCTCCCACGGTGGCTACGCCAAGACCCAGCCATTGGCTGCGTACCAGGCCCAGCGTCGTGGTGGTAAAGG TAAATCGGCGACCGGCGTGAAGGATGAGGACTACATTGCTCACCTGCTGGTCGCCAACAGCCACACCACGCTGCTGCTGTTCTCCAGCAAAGGCAAGGTG TACTGGCTGAAAACCTACGAAATCCCGGAAGCGTCCCGTGCTGCCCGTGGTCGCCCACTGGTCAACCTGCTGCCGCTGGACAGTGATGAATACATCACCA CCATGCTGCCGGTCGAGGAATACACCGAAGGTCACTTCATCTTCATGGCCACCGCCAAAGGCACCGTGAAGAAGACCCCGCTGGAATCCTTCAGCCGTCA GCGCAGCGTGGGCTTGATCGCCCTGGAGCTGGACGAAGGCGACGTGCTGATCTCTGCGGCCATCACCGATGGCGAGCGTGAAGTCATGCTGTTCTCCGAC GGCGGCAAGGTCACACGCTTCAAGGAATCCGACGTTCGCGCCATGGGCCGTACCGCCCGCGGTGTGCGCGGCATGCGCCTGCCAGAAGGGCAGAAGCTGA TTTCGATGCTGATCCCGGAAGAAGGCAGCCAGATCCTCACCGCTTCCGAGCGCGGTTATGGCAAACGCACCGCCATCAGCGAGTTCCCGGAGTACAAGCG TGGCGGCCAAGGCGTGATCGCCATGGTCAGCAACGACCGCAATGGCCGTCTGGTCGGCGCGGTCCAGGTGCTCGATGGCGAGGAGATCATGCTGATTTCC GACCAGGGCACCCTGGTACGTACCCGTGTGGCTGAAGTGTCGAGCCTGGGCCGTAATACCCAGGGCGTCACCCTGATCAAGCTGGCCAAGGACGAGAAAC TGGTCGGCCTGGAGCGTGTCCAGGAGCCATCGGAAGTCGAAGGCGAAGAGCTGGAAGGCGAGGAATTCGAAGGCGAGGTGATCGCAGCAGGCGATGACAA CGTCGACGAGCCAACCCTCGACGCTGCCGCAGACGAAGAAGAACCGCAGGAATAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCGGACACACAGGGGGCGGATGAAGATTCGCCCCCTTGTTGTTTGTCCCTTGTGAAATAGCACGTCCTTTGGCTGGACGCGGTCAATGTGGGAGCTGGCT TGCCTGCGATGGCAGCGCCGCGGTATCACTGCGCTACCGAGGTGCCCTTATCGCAGGCAAGCCAGCTCCCACAAGGGTTCGCTCCAGAGAAAGGTTGTTG CCGAACATGATTGCAGCCCTACCAAATCAGAGTGAGATTGGATGTGAGCAAGAGAGCCTATAACTTCTGTGCCGGTCCCGCGGCGCTTCCTGAAGCAGTC CTGCAGCGTGCGCAGGGTGAACTCCTCGACTGGCATGGAAAAGGCCTCTCCGTGATGGAAATGAGCCATCGCAGCGATGAGTTCGTGTCCATCGCCACCA AGGCCGAGCAGGATCTGCGTGACTTGCTGGACATCCCATCCAACTACAAAGTGTTGTTCCTGCAGGGCGGCGCCAGCCAGCAGTTCGCCCAGATCCCGCT
Amino Acid Sequence
>DNA gyrase subunit A
MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDWNKPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRY LLVDGQGNFGSVDGDNAAAMRYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTKIPNLLVNGSSGIAVGMATNIPPHNLGEVIDGCLALIDN PELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRIYMRARSIIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINVVALIDGRPRILNLKDLLEAFVRHRREVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKA SPTPSEAKEALISTPWESSAVVAMVERAGADSCRPETLDPQYGLREGKYFLSPEQAQAILELRLHRLTGLEHEKLLAEYQEILNQIGELIRILSSAVRLM EVIREELEVIRAEYGDVRRTEILDARLDLTLGDMIPEEERVVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLLFSSKGKV YWLKTYEIPEASRAARGRPLVNLLPLDSDEYITTMLPVEEYTEGHFIFMATAKGTVKKTPLESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSD GGKVTRFKESDVRAMGRTARGVRGMRLPEGQKLISMLIPEEGSQILTASERGYGKRTAISEFPEYKRGGQGVIAMVSNDRNGRLVGAVQVLDGEEIMLIS DQGTLVRTRVAEVSSLGRNTQGVTLIKLAKDEKLVGLERVQEPSEVEGEELEGEEFEGEVIAAGDDNVDEPTLDAAADEEEPQE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site