Pseudomonas simiae MEB105, RU03_RS00045

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas simiae strain MEB105 contig_1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ATACCGTGATCGGCAACGGCGTGAAGCTCGACAACCAGATCCAGATCGCCCACAACGTGCAGATTGGCGATCACACCGCCATGGCGGCCTGCGTGGGTAT CTCCGGCAGTACCAAGATCGGCAAGCATTGCATGCTCGCCGGTGGCGTCGGGTTGGTCGGGCATATCGATATTTGCGACAACGTCTTCATCACCGGCATG ACCATGGTCACTCACTCGATTACCGAGCCTGGGGCCTACTCTTCCGGTACCGCCATGCAGCCCGCGGCTGAATGGCGCAAGAGTGCAGCTCGGTTGAGGC AGCTTGACGACATGGCTCGACGTCTCAAACAGCTGGAAAAGCGTGTTGGGGACGTGACCCCTGGCGGTAATGCTTCATCAGAAGGCTGATACCATTTCCA TATCAAGTGTGCACAGCCGCTAGACTGCCTCCTTGATTTGCTAGCGGGGCGTGCTTTTAGTTCGCCCGCCCCCAATCTTTATTACAGGCTTCCCCCCGAA
DNA Sequence for Gene
>RU03_RS00045
ATGATGGACATCAACGAGATTCGCGAATACCTGCCTCACCGTTACCCGTTCCTGCTGGTGGATCGCGTAGTGGACCTCAACGTCGAGGAAAAGCGCATTC GTGCCTACAAGAATGTCAGCATCAACGAACCGTTCTTCAACGGTCACTTTCCCGCGCATCCCATCATGCCGGGTGTGTTGATCATCGAAGCGATGGCCCA GGCTGCCGGTATCCTTGGTTTCAAAATGCTCGACCTCAAGCCTGCCGACGGCACGCTTTACTATTTCGTGGGCTCCGACAAGTTGCGTTTCCGCAATCCG GTGACCCCTGGCGACCAGTTGATCCTGGAAGCCAAGTTCATCAGCTGCAAGCGCCAGATCTGGAAGTTCGAATGCCAGGCCTCGGTGGACGGCAAGCCGG TGTGCTCCGCTGAGATCATCTGTGCGGAACGCAAACTATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTTTGATTGACCCTCGCGCAATCATCGATCCGTCGGCCGTTCTGGCCGCCGACGTTGAGGTCGGCCCCTGGTCGATCATCGGCGCAGGTGTGGAAATCGG CGAGGGGACTGTCATCGGGCCGCACGTGATCCTCAAAGGTCCGACCCGCATTGGCAAACACAATCGCATCTACCAGTTCTCCTCGGTAGGCGAAGACACC CCGGACATGAAGTACAAGGGCGAAGAGACTCGCCTGGTCATCGGTGATCACAACATCATCCGTGAAGGCGTGACCATTCACCGTGGCACCGTTCAGGATC GGGCCGAAACCACCCTGGGTGATCACAACCTGGTCATGGCTTACGCGCACATCGGTCACGACAGCGTCATCGGCAACCACTGCATCCTGGTCAACAACAC CGCGTTGGCCGGGCATGTGCACGTTGACGATTGGGCGATCCTGTCCGGGTTCACCCTGGTGCATCAGTACTGCCATATCGGCGCCCATAGCTTTTCCGGC
Amino Acid Sequence
>3-hydroxyacyl-ACP dehydratase
MMDINEIREYLPHRYPFLLVDRVVDLNVEEKRIRAYKNVSINEPFFNGHFPAHPIMPGVLIIEAMAQAAGILGFKMLDLKPADGTLYYFVGSDKLRFRNP VTPGDQLILEAKFISCKRQIWKFECQASVDGKPVCSAEIICAERKL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site