Pseudomonas simiae 2-36, LS88_RS22395
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas simiae strain 2-36 scaffold9.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGTGAAGCGGAAAAGCTGCGGGAGCTGTGCTCGCGCTATAAGACCCAACTGATCATCAACGACGACGCTGAACTGGCCGCGCGCCTCGGCGTCGGCGTGC ACCTGGGCCAGACCGACGGCCCGCTGACCCCGGCCCGGGCCCTGCTCGGCTCCAAGGCGATCATCGGTTCCACCTGCCACAGCCAGATCGAACTGGCCGA GCAGGCGGCCAAGGAAGGCGCCAGTTATGTCGCCTTCGGCCGCTTCTTCAATTCCAACACCAAGCCTGGCGCGCCTGCCGCGACCGTGGAGATGCTGGCC CAGGCCCGCACACGTTTGCAGCTGCCAATCTGCGTGATCGGTGGCATCACCCTGGAGAACGCCGAGCCCTTGGTGGCCCATGGCGCCGACCTGCTGGCGG TGGTGCACGGCCTGTTTGGCGCCGACAGCACCCAGGAAGTCACGCGCCGCGCCCGTGCGTTCAACGCCCTTCTTAAGATTTGATTTCAGAGAGCCCGATC
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| DNA Sequence for Gene |
>LS88_RS22395
ATGTCCCGTTCCGAAACGCTGTTTGCCAATGCCCAGAAACACATCCCCGGCGGTGTGAACTCCCCCGTGCGTGCGTTCAAGAGCGTGGGCGGCACGCCGC TGTTCTTCAAGCACGCCGAAGGCGCCTACGTCACCGACGAAGATGACAAACGCTACGTGGACTATGTCGGTTCCTGGGGCCCGATGATCCTCGGCCACAG CCACCCGGACGTGCTGGATGCGGTGCGCAAGCAGCTGGAACACGGCCTGTCCTACGGCGCGCCGACCGCCATGGAAACCGAGATGGCCGACCTGGTCTGC TCGATCGTACCGTCGATGGAAATGGTGCGTATGGTCAGTTCCGGCACCGAAGCCACCATGAGCGCGATCCGCCTGGCCCGTGGTTTCACCGGCCGCGACA GCATCATCAAGTTTGAAGGCTGCTACCACGGTCACTCCGACAGCCTGCTGGTGAAAGCCGGTTCCGGCCTGCTGACCCAAGGCGTGCCAAGCTCCGCCGG TGTGCCGGCGGCATTCGCCAAACACACGCTGACCCTGCCGTTCAACGACATCGCCGCCGTCGAGCAGATGCTCAATGAAGTGGGCAAGGACGTGGCGTGC ATCATCGTCGAGCCGGTGGCCGGCAACATGAACTGCGTACCACCGGCACCAGGCTTCCTCGAAGGCCTGCGCGCGCAGTGCGACAAACACGGCGTGGTGC TGATTTTCGACGAAGTGATGACCGGTTTCCGCGTCGCGCTCGGCGGCGCCCAGGCTCACTATGGTGTCACGCCGGACCTGAGCACTTTCGGCAAGATCAT CGGCGGCGGCATGCCGGTGGGCTGCTTCGGCGGCAAGCGCGAAATCATGCAACACATCGCGCCGTTGGGCCCGGTGTACCAGGCGGGCACCTTGTCGGGT AACCCGCTGGCCATGGCCGCCGGCCTGACCACCCTGCGCCTGATCAGCCGCCCGGGCTTCCACGCCGAGCTGACCGACTACACCACGCGCCTGCTGGACG GCCTGCAACAGCGCGCCGATGCCGCCGGCATCCCCTTTGTTACCACCCAGGCGGGCGGGATGTTCGGCCTGTATTTCAGCGGTGCCGACGACATCGTGAC GTTTGATGACGTAATGGGCAGCGACGCCGATTTGTTCAAGCGTTTCTTCCACTTGATGCTGGAAGGCGGTGTGTACCTGGCGCCAAGCGCTTTCGAAGCC GGCTTCACCTCGATCGCCCATGGCGAAGCCGAGCTGAAATTGACCCTCGATGCCGCCGAGCGCGCCTTTGCTGCACTGAAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TTGGCCGAAAAAATCAGGCACCGCGCAAACGGTGTCTGATTTGCTACTTTGCTTACAGAGATTTCCGCGTTTTTTAGAGAAATCACCTGCAATCCGGCAG ATAACTTGCCCAAGCAGCAGAAAAACGAGTAAAGACTTTGTAAGCAGAGGCCTGCTTATTTCATAATGCGCGCTTATTGGATCCCCCGAGGATCCGCGCG CCCCGTCAGAGGTAAGTCGATTCCCATGAAACGCACCGGCCGCACCCTGGTTCTGGGCTGCCTGTTGCTCCTTCAGCCGCTGCTGGCGCATGCACAAGCA GGCGGCAACTCGTTGTTAATCCCAGCGATGGGTCGTTGCACCCTCAATACCCAGCCAGACAGCCAGGCCGAAGCCTTGAGCGCGTGCCAGAAACAGGCCG ATGGCGGGGATGCGCAGGCGCAATACGAGTTGGGCGAGTACTTCCACGACAGTAAAAACCCGGCCCGCGACCTCAACAAGGCGTTGAGCTACTTCGAGAA
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| Amino Acid Sequence |
>glutamate-1-semialdehyde 2,1-aminomutase
MSRSETLFANAQKHIPGGVNSPVRAFKSVGGTPLFFKHAEGAYVTDEDDKRYVDYVGSWGPMILGHSHPDVLDAVRKQLEHGLSYGAPTAMETEMADLVC SIVPSMEMVRMVSSGTEATMSAIRLARGFTGRDSIIKFEGCYHGHSDSLLVKAGSGLLTQGVPSSAGVPAAFAKHTLTLPFNDIAAVEQMLNEVGKDVAC IIVEPVAGNMNCVPPAPGFLEGLRAQCDKHGVVLIFDEVMTGFRVALGGAQAHYGVTPDLSTFGKIIGGGMPVGCFGGKREIMQHIAPLGPVYQAGTLSG NPLAMAAGLTTLRLISRPGFHAELTDYTTRLLDGLQQRADAAGIPFVTTQAGGMFGLYFSGADDIVTFDDVMGSDADLFKRFFHLMLEGGVYLAPSAFEA GFTSIAHGEAELKLTLDAAERAFAALK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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