Pseudomonas simiae 2-36, LS88_RS26870
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas simiae strain 2-36 scaffold5, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ATGGAAACGCGGGTGATTCTGCAGGGTGGCGAGGATCTGCGCCGCCAACGGCCGGGTGTCGAACAGCATTTGCGGGTCGATACCGGCGCTGGGGCTGAGC ATCAGGTTGCGCACGTCGTCGCCGGCAGCGTTGTTGGGGCCCAGATCGGCAGCCAACAGCATGGCAATCAACGCGCCCTCTTCGGCGCCGATCCCGCGAA TCTGCAGATTGGCGCGGTTAGTCGCCTCGATCACCCCGCCCGCATACGCCTGGGCTGCGTCCGCCACTGCGCAGGCTTGGGCGGCGCTGATCGAACCACC GGCCAATTTGATCCGACAAATGCCACCGTCCAGCGCCTGGACAATACGCAGCAACCCCGGACAAGCCGAGGGGCGCAAGGTATTCACAGCGGGCGTTGGG TTCACGGGGCTACCGGTTGATGGGTAAAGGCGCGGTATTATGCCTGCTTTGTCCGGCGGCATGAAAAGCCTGCCCGTCGGATGTCGTTCAAGGAATATTT
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| DNA Sequence for Gene |
>LS88_RS26870
ATGTCGCCCTGGCTGACGGTTGTAGGCATCGGTGAAGACGGCTTCAAGGGGCTGGGCAGGAATGCCCGGCATGCCCTGTTGCGCGCCACGCGGATTATAG GCGGCCAGCGCCAGTTGGACCTGCTGCCGGTGTGTATTCGGGGTGAGCGCGAGTTGTGGCCGAGCCCGTTTTCCCTGGAACCGGTGCTGGCGCGGCGTGG CGAGTCGGTGTGTGTGTTGGCCAGTGGTGATCCGATGTTCTATGGCGTGGGCGCGAGCCTGGCGCGGCAGGTGGCGGCTGAAGAGTTGCTGGTCTTGCCG GCGCCTTCGTCGGTGTCGTTGGCGGCGGCGCGGCTGGGCTGGCCGTTGCAGGAGGTGGTGACGTTATCCGTGGTGGCCCGGCCGCTGGCGGCGCTGAATG CGCATCTGGCCAGTGGGGTGCGGCTTTTGGTGTTGAGTAATGACGGCCGAAGTCCGGCGTTGATTGCTTCTTTGCTGGCTGAATCCGGTTTCGGCCCGAG CCGGCTGAGTGTGTTTGAGCACCTGGGCGGCACGGATGAGCGACGCATCGACGGCGTGGCGAGTGATTGGCGTCCGGCTTGCGTCGCCGATTTGAATCTG GTCGCCATCGACTGCGTGGCCTCTGGCGATACGCCCCGTCTGTCGCGTCTGGCGGGCCTGCCAGATTCAGCTTTCAAACATGACGGCCAATTGACCAAAC GCGATGTGCGCGCCCTGACCCTGGCCCGTCTTGCGCCGATGCCCGGCGAACTGCTGTGGGACGTGGGTGCAGGCAGCGGCTCCATCGGTATCGAGTGGAT GCGGGCTCACCCGAGCTGCCGGGCAGTGGCGATTGAAGCGGATGAAGGTCGCCAAGGCCTGATCGAACACAACCGCGAGGCCCTTGGCGTGCCGGGCCTG CAACTGGTTCGCGGCAAAGCGCCGGATGCGCTCGACGGTCTGGAAGCCCCGGACGCCATCTTCATCGGCGGCGGCGTCACCCGTGACGGCGTGCTCGACA CCTGCTGGCACCATCTGCGGCCGGGCGGTCGGTTGGTCGCCAACGCCGTGACGCTGCAAAGCGAAATGGCCTTGATGGACTGGCGTACGCGTTATGGCGG AGAACTCACGCGTATCCATGTCGCCCAGGCCCAGCCGCTGGGAGCGTTCGACACGTGGCGCCAGGCATTGCCGATCACACTGCTGGAAGTGGTCAAGCCG CGATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AACGCATCCTGCTGCTGGGCGGCGTGACTGAAGCGCTGGCCATCGCCCGTACATTGGGCCCGGAACATATCTACAGTTTGGCCGGTGTTGGGCGCGTGCC GACTGACTTGGCGTGCCAGGTGCGGGTGGGTGGGTACGGCGGGGCCGAGGGATTGGCACAGTTTGCTCGACATGAGCAGATCAGCCTGATTCTCGACGCG ACCCATCCGTATGCGGCACAGATCAGCCGCAACGCAGCCGAGGCGGCAAGGATTTGCGGGGTGCCTTGCTGGGCGCTACGACGCCCGGCCTGGCAGCCAC AGGCGGGGGACGATTGGCGAGAAGTCAGTGATTGGGCCTCGCTGATTGAAGCACTCAAACCTTTCAAGCGCCCGCTGTTCACGCTGGGCCGTGAGCCGTT GCAGCACCTTGATGAAATCCCGCCGGAGCAGTTCTGGACACTGCGCGCCCTGGATGTGTATCCGGGGAATGAGCGTTGCGAAGTGATTGGCGCGCGAGGC
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| Amino Acid Sequence |
>precorrin-6Y C5,15-methyltransferase
MSPWLTVVGIGEDGFKGLGRNARHALLRATRIIGGQRQLDLLPVCIRGERELWPSPFSLEPVLARRGESVCVLASGDPMFYGVGASLARQVAAEELLVLP APSSVSLAAARLGWPLQEVVTLSVVARPLAALNAHLASGVRLLVLSNDGRSPALIASLLAESGFGPSRLSVFEHLGGTDERRIDGVASDWRPACVADLNL VAIDCVASGDTPRLSRLAGLPDSAFKHDGQLTKRDVRALTLARLAPMPGELLWDVGAGSGSIGIEWMRAHPSCRAVAIEADEGRQGLIEHNREALGVPGL QLVRGKAPDALDGLEAPDAIFIGGGVTRDGVLDTCWHHLRPGGRLVANAVTLQSEMALMDWRTRYGGELTRIHVAQAQPLGAFDTWRQALPITLLEVVKP R
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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