Pseudomonas simiae 2-36, LS88_RS15030
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas simiae strain 2-36 scaffold4.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GAAGCTGCATTACAGCGGCCATCTGTCCGCGCAAACCCGCTATCCCGACGGCCTGAAAGCCATTCTCGGCGAGTACTTCGGGCTGCCTGTGGAGATTGAA GAGTACGTCGGCCAATGGTTGGAGTTGCCCGAACGCAGCCGCGTCAGCGTGAGCGCCAACCGCCTGGGCGTGGACTTTTGCCTGGGCAGCTTCGTATGGG ACCGCCAGCACAAATTCCGTATCCGCCTGGGCCCGCTCACGCTGGAGGACTACATGGGCATGCTGCCCGGCCAACAGCCGTTCAACGAGCTGGTGGCGTG GGTGGCCGAGTACCTGGGCCATGAACTGGACTGGGACCTCAACCTGGTTTTGCAACAACCTGAAGTGCCGGCACTGCAACTCAACGGCCAGTTCCGCCTG GGCTTCAACACCTGGCTCGGTAGCCCTGCGCACGACGCCAACGACCTAATCCTGGCCCGGCATTACGCCGATCAGGCCACCACCTCAAGGAATCCAGAGC
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| DNA Sequence for Gene |
>LS88_RS15030
ATGGGTGAAATCAGTCGCGCCGCACTGTTCGGCAAACTCAACAGCGTGGCCTACAAGGCCATCGAAGCCGCCACCGTGTTCTGCAAGCTGCGGGGCAACC CGTATGTGGAACTGGCTCACTGGTTTCACCAGTTGCTGCAACTGCAGGACTCGGACCTGCACCGCATCATCCGTCAGTTCAACGTGGAGCCGGCGCGCCT GGCCCGTGACCTCACCGAAGCGCTGGATCGTTTGCCGCGTGGCTCGACCTCGATCACCGACCTGTCCTCGCATGTGGAAGAAGCGGTTGAGCGCGGCTGG GTCTACGGCAGCCTGATGTTCGGTGAAAGCCAAGTGCGCACCGGTTACTTGGTGCTTGGTATCTTGAAGACACCCAGCCTGCGTCATGCGTTGCTGGGCT TGTCGTCGGAATTCGACAAGATCAAGGCCGAAGCCCTGAGCGAGCGCTTTGACGAATACGTCGGCGATTCGCCGGAAAATGCCCTGAGCGCAAGCGACGG TTTCAACGCCGGCGCCGTTCCGGGCGACGCCAGCGGTGCGATGGCGCCGAGTGCGATGGGCAAGCAGGAAGCCCTCAAGCGTTTCACGGTCGACCTGACC GAACAGGCGCGCAGCGGCAAACTCGACCCGATTGTTGGCCGTGATGAAGAAATCCGCCAACTCGTCGACATCCTCATGCGCCGCCGCCAGAACAACCCGA TCCTCACCGGTGAAGCCGGGGTGGGCAAGACCGCGGTGGTCGAAGGTTTCGCCCTGCGTATCGTCGCCGGTGACGTGCCGCCAGCATTGAAAGACGTGGA ACTGCGCAGCCTTGATGTGGGCCTGCTGCAAGCCGGCGCCAGCATGAAAGGCGAATTCGAACAGCGCCTGCGCCAGGTTATAGAAGACGTGCAGGCCTCG CCCAAGCCGATCATTCTGTTTATCGACGAAGCCCACACACTGGTGGGTGCCGGTGGTGCCGCCGGCACCGGTGATGCAGCCAACCTGCTCAAGCCGGCGT TGGCACGTGGCACCTTGCGCACCGTGGCCGCGACCACCTGGGCCGAGTACAAGAAGCACATCGAGAAGGACCCGGCGCTGACCCGGCGTTTCCAGGTGGT GCAAGTCGCCGAGCCGTCGGAGGACAAGGCGCTGCTGATGATGCGCGGCGTGGCGTCGACCATGGAAAAACACCACCAGGTGCAGATCCTCGATGAGGCG CTGGAAGCCTCGGTGAAGCTATCTCATCGCTACATTCCAGCGCGCCAGTTGCCGGACAAGTCCGTGAGCCTGCTGGACACCGCCTGCGCTCGCGTCGCCA TCAGCCTGCACGCGGTTCCGGCCGAAGTGGACGACAGCCGCCGTCGCATCGAAGCCCTGGAAACCGAGTTGCAGATCATCGCCCGCGAACACGCCATCGG CATTGCAATTGGTGCGCGCCAGACCAACACCGAGGCGCTGTTGAGCGCTGAGCGTGAGCGTCTTGAAACCTTGGAAAGCCGTTGGGCTGAAGAGAAAGCG CTGGTAGATGAGTTGCTCGCCACCCGGGCAACGTTGCGCGAAAAAGTCGGTGTCGTGGACAGCCCTGCCGGGAACAACGAGAGCGATGAATTGCGCGCCC AGCTGGTCGACCTGCAACAACGCCTGACCGCGCTGCAAGGCGAAACCCCACTGATCCTGCCCACCGTGGATTACCAGGCCGTGGCCTCGGTGGTCGCCGA CTGGACCGGCATCCCGGTCGGCCGCATGGCGCGCAACGAGCTGGAAACGGTGCTCAACCTCGACCAGCACCTGAAGAAACGCATCATCGGCCAGGACCAC GCCCTGCAGATGATCGCCAAGCGCATCCAGACATCCCGCGCCGGCCTCGACAACCCGAGCAAACCGATTGGCGTGTTCATGCTGGCCGGCACCTCTGGCG TGGGCAAGACCGAAACCGCCCTGGCCCTGGCCGAAGCCATGTACGGCGGCGAGCAGAACGTCATCACCATTAACATGAGCGAATTCCAGGAAGCCCATAC GGTGTCGACCCTCAAGGGCGCACCTCCGGGCTATATCGGCTACGGCGAAGGCGGCGTGCTGACCGAAGCGGTACGGCGCAAACCCTACAGCGTGGTGCTG CTGGATGAGGTGGAAAAAGCCCACCCGGACGTGCATGAAATCTTCTTCCAGGTGTTCGACAAGGGCGTGATGGAGGACGGCGAAGGCCGGGTGATCGACT TCAAGAACACCCTGATCCTGCTGACGACCAACGCCGGCACCGAGCTGATTTCCCAGGTGTGCAAAGACCCGGCGAACGTGCCGGAGCCGGAGGAAATCGC CAAGGCCCTGCGCCAGCCGCTGCTGGAGATTTTCCCGCCTGCGCTGCTCGGCCGCCTGGTAACCATCCCTTACTACCCGCTGAGCGACGAGATGCTCAAG GCAATCACCCGCCTGCAACTCAACCGCATCAAGAAGCGTGTGGAGACGACGCACAAAGTGGCCTTCGATTACGACGACGCGGTGGTCGACCTGATCGTCT CGCGTTGCACCGAGACCGAAAGCGGCGGGCGCATGATCGACACCATTCTCACCAACAGCCTGTTGCCGGACATGAGCCGTGAGTTCCTCACGCGCATGCT CGAAGGCAAGGCGTTGGCGGGGGTACGGATCAGCAGCCGGGATAATGAATTGCACTACGACTTCAGCGACGCAGATTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCTGACGGAACACGGTCAAAATGTGGGAGCTGGCTTGCCTGCGATAGCGGTGTATCAGTCAACATCAATGTTGAATGTTCAATTGCTATCGCAGGCAAGC CAGCTCCCACATTGGATTCGGTTCCTTCAGTCATCAAGACCTTTACAGGACGCCCAATGCTATTCAACCAAGCCTCACGCCTGGCCAAGATCACCAGCCC CCTCGGGCCGGATGTGCTGCTGCTCAATGAAATGGGCGGCGGTGAAGAGCTGGGCAGGCTGTTCAACTATGAGCTGCAACTGACGTCCCTGGACGCCAAC ATCGACCTCAACCAGTTGCTCGGCAAGCCCATGAGCGTGGGCCTGCAACTGGCGGACGGAGGTGAGCGGCACTTTCACGGCATCGTCGCGCGGTGCAGCC AGAACATCGACCAGGGCCAGTTCGCCAGTTACCAGGTGACGCTGCGTCCTTGGTTGTGGCTGCTCAGCCGCACGTCCGACTGCCGGATTTTCCAGAACCT
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| Amino Acid Sequence |
>ATPase AAA
MGEISRAALFGKLNSVAYKAIEAATVFCKLRGNPYVELAHWFHQLLQLQDSDLHRIIRQFNVEPARLARDLTEALDRLPRGSTSITDLSSHVEEAVERGW VYGSLMFGESQVRTGYLVLGILKTPSLRHALLGLSSEFDKIKAEALSERFDEYVGDSPENALSASDGFNAGAVPGDASGAMAPSAMGKQEALKRFTVDLT EQARSGKLDPIVGRDEEIRQLVDILMRRRQNNPILTGEAGVGKTAVVEGFALRIVAGDVPPALKDVELRSLDVGLLQAGASMKGEFEQRLRQVIEDVQAS PKPIILFIDEAHTLVGAGGAAGTGDAANLLKPALARGTLRTVAATTWAEYKKHIEKDPALTRRFQVVQVAEPSEDKALLMMRGVASTMEKHHQVQILDEA LEASVKLSHRYIPARQLPDKSVSLLDTACARVAISLHAVPAEVDDSRRRIEALETELQIIAREHAIGIAIGARQTNTEALLSAERERLETLESRWAEEKA LVDELLATRATLREKVGVVDSPAGNNESDELRAQLVDLQQRLTALQGETPLILPTVDYQAVASVVADWTGIPVGRMARNELETVLNLDQHLKKRIIGQDH ALQMIAKRIQTSRAGLDNPSKPIGVFMLAGTSGVGKTETALALAEAMYGGEQNVITINMSEFQEAHTVSTLKGAPPGYIGYGEGGVLTEAVRRKPYSVVL LDEVEKAHPDVHEIFFQVFDKGVMEDGEGRVIDFKNTLILLTTNAGTELISQVCKDPANVPEPEEIAKALRQPLLEIFPPALLGRLVTIPYYPLSDEMLK AITRLQLNRIKKRVETTHKVAFDYDDAVVDLIVSRCTETESGGRMIDTILTNSLLPDMSREFLTRMLEGKALAGVRISSRDNELHYDFSDAD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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