Pseudomonas simiae 2-36, LS88_RS10215

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas simiae strain 2-36 scaffold2.1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGGGAGCGGTGCACCTCTGCCCGAAGCTTTTGATACCCATGTACGTTTACATCTCCTGTCGTCATTACGCCGAACGTCATACCGCATTCAACGCGCAGAC TACACCCCTGATGAGGGGCATTTTTAGTAGAGTTCAAAGCGGATAGAAGCAACCAGCGCTAACGCCCCACCGTTGAATCGCATACATAACAAACGGCAAC ATCGCAGTGAGTTGCCGTGTATTTAATAGTGAACGACCCGATGAGGCTTGCACTGTGTCGACCGGCGTTTAAGTTCGCATTGCGGCCGGGCTGCCCATAA GTGGCGGCAATTCTACCTGTTTGGGACCTTAACTGGAAATGCAGGATGGACGAGGCCTGAGCAGGCCGTCTCACTGGCCTTGCGGGTTGCGGTCATACTC TGTAACCCACCCGTTTTTGACTCCTACCCAACATCACCTAAGTTTGGGAGGCAGCTTAGGAAAGCTGCTTTTCCCTCATCGATGTCATGGAGCGTCACCA
DNA Sequence for Gene
>LS88_RS10215
ATGCAAAACACCTACATCTGCGCCCTTATCTTCGCGTTTCTCACCAGCATCTCCGCTACGACCACCGCAGCCCCTTCCATCAAGCCCGAAGCCCCAACCC CTATCGCCACTCAGATGTCCAAGGCCGAGCAATCCGCCAAGGTCAACCTGAACGCCGCCGATGCCGAAACCCTGCGCCGTGATCTCTTCGGCATCGGGGC TGCCAAGGCCAGGGCGATCGTTGCGTATCGCGAAAGCAATGGGCCGTTCACGGCGGTAGATGAGTTGTTGGAAGTGAAGGGGATTGGTAAGGCTTTGCTG GAGAAGAACCGCGAAAGGCTGGTGATCAATTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTCAGGCGAGAAAGCCGGTCACTGACCGGCTTTTTCACGCGTTGAAACCTGGGTTTTCAAACGCGCGCGCACAACCTCCAAGATTCGCATAGCCAATGCC GGATCTTCGACACTCCTGGCGAGCACCAATGCTCCGACCAGCGTCGACATCATCACCAGGCTTTGTTCATCACTCCGTCCATCCGCTAAAGCCGTATCAA TCTGCTTTAGCCGCGCGTCGAGTACTGCGTCCGTCGTTGTACTGTGCTGGCCCCTTAGGCCGAGTTCGGAGGACATGGTAGGCAGTGGGCAGCCTTGGTC CGGAGACGTCATGTGCCATTTCGAGAGGTAACTGTCGATAAAGGCTTCCAGCGGCCGCTCCTGGCTGAACAGCATTTCGCAATGAGCATCCAGCTCTGCC GCAGCCGCCTGCAGCGCCTTCTCCACCAACTCATCCTTGGATTTGAAGTGCGCATAAAACCCACCATGCGTCAGGTTCAGCGCCTTCATCAATGGCTGTA
Amino Acid Sequence
>competence protein ComEA
MQNTYICALIFAFLTSISATTTAAPSIKPEAPTPIATQMSKAEQSAKVNLNAADAETLRRDLFGIGAAKARAIVAYRESNGPFTAVDELLEVKGIGKALL EKNRERLVIN
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site