Pseudomonas simiae 2-36, LS88_RS05745
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas simiae strain 2-36 scaffold2.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGGGGATGAGGTCAAACTTGACACCACCGTTGACCGGCAGCGCTTACGTCAGCAATGCACTCGCCTCGGCGAGCTTGGCTACGTGCTGGACTTCAAACAA CAAACCTGGAGCTGTCAATCTCCCACCTTGCGGGAGCTCCATCACCAAGGAAACACTCAATGAATTCGATTTTCTCAGACATCGGTGAGCACATCCTGCT GACCGTCGAAGACCAACTGACCAACAACGAAGTGTCCGATGATGACGAAATGCGCGAGCACTTCATCGAAATTGGACTGACAGAGGCGCAAGCGGACGCT GCCTTGCAACTGCGGCCCCTGTACCGGCTCAACCTCTACATGATAGGTCAGTCGCCATTGTTCCGGGGCGACATGACCACTAGCTTTGATCCATACACCC GCTCATTCAAGCGCACTCAATAACACATCATCCGTAACCCAGAGGGGCAGCGTCCTGCCCTTCAGGGACTGGAGCTGCTCTCCATTCCGGAGGCTGCAAA
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| DNA Sequence for Gene |
>LS88_RS05745
ATGTCCACCCACTCATTCACACGACTCTATCAGGTCGACGAATGTCCTGATCTGTATGTCGATGCCTGTGCCTGCGACGAGCAGCGCAACTTAGTGTTTC TGTCGGCCTGGGGCCGTGACACGGCACTGCAGGAGTTCTTGGCCAGATTGACCCTCGGCTCCGCTGAAAACGGCCTGGACCAGTTTCATATCGTCGTCGA CGGCCGGAGTCATCCAGTCTTCCCCAACGTCGACATGCTGGAGAAACGAACCACCCGGCAATTCCGCGGAACGTTATTCGGCAGCCTGGCACACCTATGG CTGTTCGACCGGCGCTGCGCGCATCCCGACCGGGCCAATCATTTCTCCTACGCCCTTCTACAGAACGGGCAATCTCCTCACCAAAAGCTTTGGCCCCTGG TAATGGACACATGCCCATTACCGCTGCTACCGCATTGGCATAACCATGTTATGGAAGTGCTCACCCAACACGACATGTTGCAGTCCTTACCGGGATCGTT AGGTGCTATCTCTGCCTGGCGTTTGTCGCTGCATCTCGACGTACTTGAACCCGCCCTGGGTGATCTGATCCGCCAGGGGCATCTCTCAACCCACGCTCAG TTGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCTTGATTCAGGAGCCTCATCATGGCCTTGATGTTCCCACGCCTGGCGCGCAACTTCGCTCGCAATGGCTACTACCCTACCGACGAAACGACTCTGGAA CGGACCCTGCAGGCATTGGCTCCCTCTCCAACCGGCAAGATGCGGATCTGCGATCCATGTGCCGGCGAAGGGGTCGCCCTGGCCGAAGCAGCTCATTTTC TTGGGCGAGACCGCACAGACACATTCGCAGTTGAATACGACAAAGAGCGTGCCGAACATTGCAGGACGCTGCTGGATCGCGTTCTGCACAGCGACCTCAT GGACACCATGATCAGTCGTCAGGCCTTCGGTCTACTCTGGCTCAATCCACCTTATGGAGATTTGGTCTCCGATCACTCTGGCGCGTCGCAGTACCAGGGC AACGGACGCCGCCGCTTGGAGAAAATGTTCTATCAGCGAACGCTGCCGCTGCTGCAATACGGCGGCGTGTTGGTATTCATCGTTCCGCACTACGTCCTGG
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| Amino Acid Sequence |
>hypothetical protein
MSTHSFTRLYQVDECPDLYVDACACDEQRNLVFLSAWGRDTALQEFLARLTLGSAENGLDQFHIVVDGRSHPVFPNVDMLEKRTTRQFRGTLFGSLAHLW LFDRRCAHPDRANHFSYALLQNGQSPHQKLWPLVMDTCPLPLLPHWHNHVMEVLTQHDMLQSLPGSLGAISAWRLSLHLDVLEPALGDLIRQGHLSTHAQ L
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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