Pseudomonas simiae 2-36, LS88_RS00890 (zipA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas simiae strain 2-36 scaffold1.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GAACCCGGCGCCGTTCTGCATGCTCGACGAAGTTGACGCCCCGTTGGATGACGCTAACGTTGGACGGTATGCGCGGTTGGTCAAAGAGATGTCCCAGACC GTGCAGTTCATCTATATCACCCACAACAAGATCGCCATGGAGATGGCTGACCAATTGATGGGGGTAACGATGCACGAGCCGGGCTGTTCGCGTTTGGTCG CGGTGGATGTGGAAGAAGCGATGGCGATGGTGGAGTCTTGATCCTTGTTGGGACAGAATTTTTATAGCGCGCGGTAAGACGCTTTACCGGTCTGGCGAAA GTGGCAAATGGACATATTTGTTCAAGGCTTTTTGACAGACGGTGTAAAGTTATCTTTGGTCGTGCTAGTTTAATGTCAAATTTTCGTATGCGTGGGCAAA ACGTCAGTCAGAACATAGAGTTGGCGCCACGTTTTAAAGCGGTTTGCACGTTGCTAAACCCCTTATTTTTCAGCATTTTTTATTAGAGGCACGGGATTAC
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| DNA Sequence for Gene |
>LS88_RS00890
|zipA
ATGGAAATCGGTCTGCGCGAGTGGCTGATCGTCATCGGCATTATTGTCATTGCCGGTATTCTTTTTGATGGCTGGCGCCGCATGCGCGGTGGCAAGGGCA AGCTCAAATTCCGTCTGGACCGCAACCTGTCCAACTTGCCTGACGACGACGGCAGCGCCGAGCTGCTGGGGCCGCCCCGTGTGCTGGATACCCATAAAGA ACCGCAGTTGGACGAGCACGACTTGCCGTCCATGAGCGCGCCGGTGCGAGAAGCGCGCGAGCCGTCTTCCAAACGTGGCAAGCGCGCCGCGCCGGTGGTG GCAGAGTCACGTCAGGCTGATTTGGACCTGGACGTCGATGACGGCCCGAGCTTCAGCAGCCGCGACGATGATTTCCCGGACGAAAACGCTGGCAAGAACG CCCCGCGCCAATCCGTGAACGACCAGCCTGCCGCCGAAGAAGTGTTGGTGATCAGCGTGATCTGCCGCGACGCCGCCGGCTTCAAGGGCCCGGCTTTGTT GCAAAATATTCTGGAAAGCGGCCTGCGCTTCGGCGAGATGGATATTTTCCACCGTCACGAAAGCATGGCGGGTAACGGCGAAGTGCTGTTCTCCATGGCC AACGCGGTCAAGCCAGGCACCTTCGATCTGGACGATATCGACCTGTTCAGCACCCCGGCGGTGAGCTTCTTCCTCGGCCTGCCAGGTCCGCGTCACCCGA AACAGGCTTTCGACGTGATGGTGGCCGCAGCCCGCAAGCTGTCCCAGGAACTGAACGGCGAACTCAAGGACGACCAACGCAGCGTCCTCACCGCCCAGAC CATCGAGCATTACCGTCAGCGCATCGTCGAGTTCGAGCGTCGCGCCCTGACACAGAAACGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGTTCGATCTTAAGCGTTGTCTGTAGAATCCGTGCACTAACATATTGAGCAGCTTCGGCTGCTCTTTTGCTTTATGAGAGAACACCCATGACCGCCGCCC ACACCCGCATCCTCGAACTGCGCGCTGAACTGGATCAGCACAACTACCGTTACCACGTCCTCGACGAGCCGAGCATTCCGGACGCCGAGTACGACCGTCT GTTCCATGAGCTCAAGGCCCTGGAAGCCGAGCATCCGGACCTGGTCACGCGCGATTCTCCGACGCAGCGGGTCGGCAGTGCGGCGTTGTCGGCGTTCACC CAGGTCAAGCATGAGATCCCCATGCTCAGCCTCGGCAACGCCTTTGACGAAACCACCATGCTGGAATTCGATCGCCGGGTCACCGAAGGCCTCGACCTGC CGGCCGGTGATCTGTTTGGCAGTGGCGCGGCGGTGGAGTACAGCTGCGAACCGAAGCTGGATGGCCTGGCGGTCAGCCTGCTGTATCAGGACGGCGAACT
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| Amino Acid Sequence |
>cell division protein ZipA
MEIGLREWLIVIGIIVIAGILFDGWRRMRGGKGKLKFRLDRNLSNLPDDDGSAELLGPPRVLDTHKEPQLDEHDLPSMSAPVREAREPSSKRGKRAAPVV AESRQADLDLDVDDGPSFSSRDDDFPDENAGKNAPRQSVNDQPAAEEVLVISVICRDAAGFKGPALLQNILESGLRFGEMDIFHRHESMAGNGEVLFSMA NAVKPGTFDLDDIDLFSTPAVSFFLGLPGPRHPKQAFDVMVAAARKLSQELNGELKDDQRSVLTAQTIEHYRQRIVEFERRALTQKR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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