Pseudomonas simiae 2-36, LS88_RS00255
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas simiae strain 2-36 scaffold1.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGGCTGGACCTGATCCGCCAACTGCGTACCCAGGCCAAGACCTTCCCGATCCTGATCCTCACCGCGCGTGGCAACTGGCAGGACAAGGTCGAAGGCCTGG CAGCCGGTGCTGATGACTATGTGGTCAAGCCGTTCCAGTTCGAAGAACTGGAGGCGCGGATGAACGCCTTGCTGCGCCGCTCCAGCGGGTTTACCCAGTC GACGATTGTTGCGGGCCCGTTGCTGCTGGACCTCAATCGCAAGCAGGCGTCCCTCGACGAACAGCCCCTGGCGCTGACGGCCTACGAATATCGGATCCTT GAGTACCTGATGCGCCATCACCAGCAGGTGGTCGCCAAGGACCGCTTGATGGAACAGCTCTACCCGGATGACGACGAGCGTGATCCGAATGTCATCGAAG TGTTGGTCGGCCGCCTGCGTCGCAAGCTGGAAGGCCCGGCCGGGTTCAAGCCGATCGACACCGTGCGTGGCCTCGGCTACCTGTTCAACGAGCGCTGCCG
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| DNA Sequence for Gene |
>LS88_RS00255
TTGATTCGCTCGCTTCGCGTGCGCTTGATGCTGGCGGCCGCCACCCTGGCCGTGCTGTTCATGCTGGGCTTGTTGCCCGCCATGCAAGGGGCGTTCAGCC TGGCGTTGCAGGATTCCATCGAGCAGCGCCTGGCGTCGGACGTCACGACGCTGATCTCTGCCGCACGGGTTGAAAACAACCGCCTGCTGATGCCGGCGCA ATTGCCGGACGAGCGCTTCAACCTCACCGACAGCCGCCTGCTCGGCTATATCTACGATCGCGAAGGCCATCTGGTGTGGCGTTCGCGGGCGACCAAGGAA GAAAACATCAACTACAAGCCGCGCTACGACGGGCGCGGTAACGAATTCGCGCGGATCCGTGAGGCCAACGGCCAGGAATTCTTCGTCTATGACGTCGAGG TCCGGCTGCTGGGCGGCAAGAGCGCGGCGTTCAGTATTGTCGCCCTGCAACCGGTGCGCGAATACCAGTTGACCCTCGAAGGCCTGCGCGAAAACCTCTA CCTGGGCTTCGGCGCAGCGTTGCTGGTGCTGTTGACCTTGCTGTGGCTGGGCCTGACTTGGGGCCTGCAGGCCCTGCGGCGCCTGAGCCAGGAACTTGAC CAGATCGAAGGTGGCACCCGCGAAAGCCTATCCGAACAACACCCCCGTGAATTGTTGCGCCTTACCGGTTCCCTCAACCGCTTGCTGCACAGCGAACGTG AGCAACGGGCGCGTTACCGCGACTCCCTCGACGACCTGGCCCACAGCCTGAAAACCCCGCTCGCGGTACTTCAAGGTGTGAGCGAAGACATGGCCCAGCG CCCGGAAGACCGCGACCAGGCCTGGGTGCTGCAATCGCAGATCGAGCGCATGAGCCAGCAGATCAGCTACCAACTGCAACGCGCCAGCCTGCGCAAGAGC GGCCTGGTGCGTCACCAGGTGCGCCTGGAGCCGGTGTTGCAAAGCCTGTGCGATACGCTGGACAAGGTCTACCGCGACAAACGTGTCACGGTGTCCTTTG AGCTGCCGGAAGAGTGCGACGTGCCGATTGAGAAGGGCGCTTTGCTGGAGTTGCTCGGCAACCTGCTGGAAAACGCCTACCGCTTATGTTTGAGCGAGGT GCGCATCAGCTTCGCGGAAAACCTCGAAGGCAGCGAGTTGTGCATCGAGGATGATGGGCCAGGTGTGCCGCCGGATCAGCGCGCCCGGATTCTGCAGCGG GGCGAGCGGCTGGACCGCCAGCATCCGGGGCAGGGGATCGGCTTGGCGGTGGTCAAGGACATCATTGAAAGCTACGGTGCACGGCTGACCTTGGGCGATT CGCCTTTGGGCGGGGCGGCGTTCAAGATTCATTTTCCGGCCTTGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCGTTACTGGCCGTGCGGGCCTCCTCGCAGGCAAGCCAGCTCCCACAGTGGATGGGGTTCGAATCACAATGTGTAAACCCGATCCACTGTGGGAGCCGGG CTTGCCCGCGATGGGGCCCTTCCAGGCCATACAGCTCTAACTCTCTTGGGCCCGGTAAGCCCCCGGTGTCAGCCCCGTCCACTTTTTGAACGCCCGATGA AACGCCGACGGTTCGGAAAAGCCCAGCTGCTCGGCAATCTCCTGCAGCGACAAATCTGCGCGGCCCAAATGATAGATGGCGATGTCCCGCCGCAGCTCAT CCTTGAGTGCCTGAAAGCTGGTGCCTTCTTCACGCAAATGCCTGCGCAGGGTCTGCGGGCTGATGTGCAAGTGCTGGGCGACGGCTTCCAGGTCCGGCCA GGGACTGCGGTCGCGGCTGAGCAAGCGGCGTAGCTGGCTGCTCAAGCTGTCGCCTTCGTCCGGCCGCGACAGCAGATCGGCGGGGGAGCGTTCCAGGAAG
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| Amino Acid Sequence |
>sensor histidine kinase
MIRSLRVRLMLAAATLAVLFMLGLLPAMQGAFSLALQDSIEQRLASDVTTLISAARVENNRLLMPAQLPDERFNLTDSRLLGYIYDREGHLVWRSRATKE ENINYKPRYDGRGNEFARIREANGQEFFVYDVEVRLLGGKSAAFSIVALQPVREYQLTLEGLRENLYLGFGAALLVLLTLLWLGLTWGLQALRRLSQELD QIEGGTRESLSEQHPRELLRLTGSLNRLLHSEREQRARYRDSLDDLAHSLKTPLAVLQGVSEDMAQRPEDRDQAWVLQSQIERMSQQISYQLQRASLRKS GLVRHQVRLEPVLQSLCDTLDKVYRDKRVTVSFELPEECDVPIEKGALLELLGNLLENAYRLCLSEVRISFAENLEGSELCIEDDGPGVPPDQRARILQR GERLDRQHPGQGIGLAVVKDIIESYGARLTLGDSPLGGAAFKIHFPAL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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