Pseudomonas rhizosphaerae DSM 16299, LT40_RS18930

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0016772	transferase activity, transferring phosphorus-containing groups	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00344	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0000155	phosphorelay sensor kinase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:SM00388	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0016310	phosphorylation	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00344	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0000160	phosphorelay signal transduction system	ISM Inferred from Sequence Model Term mapped from: InterPro:SM00448	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0007165	signal transduction	ISM Inferred from Sequence Model Term mapped from: InterPro:SM00388	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	prh02025	Biofilm formation - Pseudomonas aeruginosa	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Pfam	PF00072	Response regulator receiver domain	IPR001789	Signal transduction response regulator, receiver domain	673	783	1.0E-13
CDD	cd00082	HisKA	IPR003661	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain	415	474	8.61057E-12
Gene3D	G3DSA:3.30.565.10	-	IPR036890	Histidine kinase/HSP90-like ATPase superfamily	482	648	1.2E-37
Pfam	PF07696	7TMR-DISM extracellular 2	IPR011622	7TM-DISM receptor, extracellular domain, type 2	32	170	2.0E-35
Gene3D	G3DSA:1.10.287.130	-	-	-	383	480	3.3E-19
PRINTS	PR00344	Bacterial sensor protein C-terminal signature	IPR004358	Signal transduction histidine kinase-related protein, C-terminal	570	584	1.2E-11
SMART	SM00387	HKATPase_4	IPR003594	Histidine kinase/HSP90-like ATPase	529	645	7.6E-27
Gene3D	G3DSA:2.60.40.2380	-	-	-	27	178	1.3E-37
CDD	cd16922	HATPase_EvgS-ArcB-TorS-like	-	-	541	643	4.00119E-40
SUPERFAMILY	SSF52172	CheY-like	IPR011006	CheY-like superfamily	670	787	1.71E-25
PRINTS	PR00344	Bacterial sensor protein C-terminal signature	IPR004358	Signal transduction histidine kinase-related protein, C-terminal	605	623	1.2E-11
SUPERFAMILY	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	IPR036890	Histidine kinase/HSP90-like ATPase superfamily	471	641	8.51E-34
Pfam	PF00512	His Kinase A (phospho-acceptor) domain	IPR003661	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain	418	482	4.1E-13
PRINTS	PR00344	Bacterial sensor protein C-terminal signature	IPR004358	Signal transduction histidine kinase-related protein, C-terminal	629	642	1.2E-11
PRINTS	PR00344	Bacterial sensor protein C-terminal signature	IPR004358	Signal transduction histidine kinase-related protein, C-terminal	588	598	1.2E-11
Pfam	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	IPR003594	Histidine kinase/HSP90-like ATPase	529	643	2.2E-21
Gene3D	G3DSA:3.40.50.2300	-	-	-	671	807	3.8E-29
PANTHER	PTHR45339	HYBRID SIGNAL TRANSDUCTION HISTIDINE KINASE J	-	-	666	789	1.3E-96
CDD	cd17546	REC_hyHK_CKI1_RcsC-like	-	-	672	783	3.53302E-27
SMART	SM00448	REC_2	IPR001789	Signal transduction response regulator, receiver domain	670	783	3.6E-19
SUPERFAMILY	SSF47384	Homodimeric domain of signal transducing histidine kinase	IPR036097	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily	404	483	6.47E-16
Coils	Coil	Coil	-	-	397	417	-
Pfam	PF07695	7TM diverse intracellular signalling	IPR011623	7TM-DISM receptor, extracellular domain, type 1	183	385	2.0E-55
SMART	SM00388	HisKA_10	IPR003661	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain	417	482	2.8E-15

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.