Pseudomonas rhizosphaerae DSM 16299, LT40_RS14230

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas rhizosphaerae strain DSM 16299, complete genome. [Details]
DNA Sequence Upstream of Gene
GCAACCAGGCACTGACCGTGGCCGTGGTGGACATCGGTGCGACCATGACCACCCTCAGCGTGCTGCACAACGGCCGCATCATCTATACCCGCGAGCAGTT GTTCGGCGGGCGTCAGCTGACCGAGGAAATCCAGCGCCGCTACGGCCTGTCCAACGAAGAAGCGGGCCTGGCCAAGAAGCAGGGCGGGTTGCCCGACGAC TATGTGGCCGAAGTGCTGCAGCCGTTCAAGGATGCCGTGGTGCAGCAGGTGTCGCGCTCGCTGCAGTTCTTCTTCGCTGCCGGCCAGTTCAACGATGTCG ACTACATCATGCTCGCCGGTGGCACCGCTTCCATTTCCGGCCTGGATCGGCTGATCCAGCAACGCCTGGGCACTCCGACCCTGGTGGCCAATCCGTTCGC CGACATGGCCCTGAGCAGCCGGGTCAATGCCGGCGCCCTGGCCAGTGACGCACCGGCCCTGATGATCGCCTGTGGCCTGGCGCTGAGGAGCTTCGACTAG
DNA Sequence for Gene
>LT40_RS14230
ATGGCAAGGATCAACCTGCTGCCGTGGCGCGAGCAGCTGCGTGAAGAGCGCAAGCGTCACTTTCTGATTGCCATGGCCGGCGTATTGGTAGGCGCCATCG CAGTCATTTTTCTGGCGGACCGATTCATCGGCAATGCCATCGACACCCAGACGGCGCGCAATGCCCACCTGCAGTCCGAGATCGTGCTGCTCGATCAGCG CATCAAGTCGATCAGCGAGCTCAAGGCGCGGCGCAAGCAGCTGCTCGAGCGCATGAAGACCATCCAGGACCTGCAGGGCAATCGGCCGATCATCGGGCGC ATCTTCGACCAAATGGCGCGTACGTTGCCTGACGGCGTGTACTTCACCGACGTGAAAATGGCCGACAAGAGCATTGCCATTGCCGGCGCTGCGGAAACCA ACAACCGTGTCTCCGACCTGCTGCGCAACCTCGACGCGTCGCCCTGGCTCGAAGCGCCGACCCTCAACGAGGTCAAGGCCAACACCAGCGCCGACATCAA TGGCGTCAACAGTTTCCAGCTGACCGTGCGCCAGACGGCGCCGGTACAGGCCGAAGGGGATGACAAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACCCTTCAAGCTGGATGGACAGCCTGCGCAAGGTCGAGCTAAGCGAACTGGACCTCAACAACATCGGCTCCTGGCCCACTGCGGTCAAGGTGATTGCCGG CGTGCTGCTGATGGCACTGATTCTGGGCCTGGGCTACAACTTCCACATTTCCGACCTCGAAGCGCAGTTGCAGCAACAGGCCGATCAGGAAGCCACGCTC AAGGAGCAGTTCTCCACCAAGGCCTTCCAGGCCGCGAACCTGGAGACCTACACCGAGCAGATGCAGGAGATGGAAACCTCCTTCGGGGCCATGTTGCGCC AGTTGCCCAGTGACACCGAGGTCCCGGGGCTGCTCGAAGACATCACCCGCACCGGCCTGGGCTCGGGGCTTGAGTTCGAGGAAATAAAACTGTTGCCTGA AGTGACCCAGCAGTTTTATATCGAGCTGCCGATACAGATCAGCGTGACCGGCACCTACCATGACCTGGCCACCTTCGTCAGCGGCGTGGCCAGCCTGCCG
Amino Acid Sequence
>pilus assembly protein PilN
MARINLLPWREQLREERKRHFLIAMAGVLVGAIAVIFLADRFIGNAIDTQTARNAHLQSEIVLLDQRIKSISELKARRKQLLERMKTIQDLQGNRPIIGR IFDQMARTLPDGVYFTDVKMADKSIAIAGAAETNNRVSDLLRNLDASPWLEAPTLNEVKANTSADINGVNSFQLTVRQTAPVQAEGDDK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site