Pseudomonas rhizosphaerae DSM 16299, LT40_RS13510
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas rhizosphaerae strain DSM 16299, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GTTTCCAGGCTGTGGATGATCTGCGCGGCCAGCGGACGGGTATCGACCACCTGTTCGGGGTCGATGCCGGCACTAGGGCTGAGCATGACGTTGCGCACAT CGTCGCCGGCCGCCTCCCGGGGACCCAGCCCGGCCTGCAGCAGGCAGTCGATCAGCGACTGCTGACGGTCGCCGATACCGCGAATCTGCAAGTTGGCGCG GTTGGTTGCCTCGATCGTCCCCCCGGCGTACCGCTCGGCTGCCTCGGCCACCGCATCGGCCTGCTCGGCGTGCAACTCGCCACCGGCCAGCTTGATGCGG CAGATGCCTCCGTCCAACGCCTGCACGATACGCAGCAACCCCGGACACGCCGAGGGGCGGACAACGTTCGAGGTCGTGTTCAAAGGGGCACCGGGCACAC GCGAAAAACCACTGGCAAGGGTAAGGCGCGGTATTATGCCTGCTTTGGCCGAAGGCATGAAAAGTCTGCCCGTCGGAATAGTTTTGTATGAGGAATATTC
|
|
| DNA Sequence for Gene |
>LT40_RS13510
ATGTCGGCCTGGCTGACCCTGGTAGGTATCGGTGAAGACGGTTTTGCAGGACTGGGCAAGCAGGCGCGCCGGGCGCTGTTGAGTGCCCGGCGCATCGTCG GCAGCCCGCGCCAGCTCGAATTGCTGCCGCGCTGCATCGTCGGTACCCGGGTCGCCTGGCCCAGTCCGTTCAGCCTCGATGCCGTGCTGGCCGAGCCTGG CGATGCAGTCTGCGTGCTGGCCAGCGGTGATCCGATGCTCTATGGCGTCGGCGCCAGCCTGGCGCGGCAGATTCCGGCAGCGCAGATGCACGTGTTGCCC TCGCCGTCCTCCTACTCACTGGCGGCGGCCCGCCTGGGCTGGCCACTGCAAGACGTGGTGACCCTGTCGGTAGTCGCCCGCCCGGTGGCGGCGCTGGCCG CGCATCTGTACAGCGGCCAGCGCCTGCTGGTCTTGAGCAACGACGGCAGCAGCCCGCAGGCCGTTGCACAGTTACTGTGCGAGCGCGGCTTCGGCCCTAG CCGCATGACGGTACTCGAACACCTGGGCGGGCCCAGGGAGCGGCGCATCGATGGGGGCGCAACCGACGACTTTGCCGACATCGCCGCGCTGAACCTCATC GCCATCGACTGCCAGGCCAGCCCGGACGCCCCGCGTCTGTCCCCGCTGGCCGGCCTGCCCGACAGTGCCTTTCGCCACGATGGCCAACTGACCAAGCGCG ACATCCGCGCGGTAACCCTGGCACGCCTGGCCCCCCAGCCAGACGAGCTGCTGTGGGACGTCGGCGCCGGGTGTGGCTCGATCGGCATCGAGTGGATGCG GGCCCACCCCAGTTGCCGAGCCATCGCGGTCGAGTCCGACGAAGGCCGTCAGGCCTTGATCGAACATAATCGTGACGCCCTGGGTGTGCCCGGCCTGCAA CTGGTGCGCGGGCGGGCGCCGGATGCGCTTGCCGGTTTGCCCGCACCCGACGCCATCTTCATCGGCGGTGGCGTTACCCGCGAAAACGTCCTCGCCGATT GTTGGGCAGCGCTCAAACCCGGCGGTCGCCTGGTGGCCAACGCGGTCACCCTGCAGAGCGAACTGGCCCTGGTGCAATGGCGCGAGTGCCACGGTGGCGA ACTGACCCGGCTGCACATTGCCCAGGCGGCCCCGCTGGGCGAGTTCGACACCTGGCGCCAGGCGTTGCCGATCACCCTGCTCGACACGGTCAAGCCCTTC GATGCGTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
AGAAACGGCGGAGCAACCGGCCCCGCTGCGCAGCGGCCTGACCACCGGCAGCTGCGCCACGGCCACCAGCCTGGCCGCCGCCCGGCTGTTGCTGGGCGGT GGTGCCAGCGATGCGGTGCATATCGTGCTGCCCAAGGGCAAGCAGGTATCGATGCGCCTGGAGTTCTGCCGATTGAATGCCGACGGCGCCGAAGCCGGCA CCCTCAAGGACGGCGGCGATGACCCGGATGTGACCCACGGCGCGCTGTTGCACACCCAGGTCCGCCTGCTGGATACGCCCGGCATCCGCTTCCTGGCCGG CGACGGCGTGGGCACTGTCACCCGCCCGGGGCTGGTGTTGGGCGTCGGCGAGCCGGCCATCAACCCGGTCCCTCGGCGCATGATCAGCGAACACTTGGCC CAGTTGGCCGAAGAGCATCGCTACGGCGGCGGCTTCGAGGTCACTGTCAACGTCGAGAACGGTGCCAGCCTGGCGCTCAAGACCATGAACCCGCGGCTGG
|
|
| Amino Acid Sequence |
>precorrin-6Y C5,15-methyltransferase
MSAWLTLVGIGEDGFAGLGKQARRALLSARRIVGSPRQLELLPRCIVGTRVAWPSPFSLDAVLAEPGDAVCVLASGDPMLYGVGASLARQIPAAQMHVLP SPSSYSLAAARLGWPLQDVVTLSVVARPVAALAAHLYSGQRLLVLSNDGSSPQAVAQLLCERGFGPSRMTVLEHLGGPRERRIDGGATDDFADIAALNLI AIDCQASPDAPRLSPLAGLPDSAFRHDGQLTKRDIRAVTLARLAPQPDELLWDVGAGCGSIGIEWMRAHPSCRAIAVESDEGRQALIEHNRDALGVPGLQ LVRGRAPDALAGLPAPDAIFIGGGVTRENVLADCWAALKPGGRLVANAVTLQSELALVQWRECHGGELTRLHIAQAAPLGEFDTWRQALPITLLDTVKPF DA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|