Pseudomonas rhizosphaerae DSM 16299, LT40_RS11135

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas rhizosphaerae strain DSM 16299, complete genome. [Details]
DNA Sequence Upstream of Gene
TACGTGGGCGAAAACGCGCTGTTCGAGCGGCAGCTGCTCGATGGCGAACTCGAGGTCGAACTGACCCCCAAGGCACGTTGGCCGAGAAGATGCGCGCCGG CGGCGCTGGCATCTCCGCGTTTTTCACGGCCACCGGCTACGGCACACCGATTGCCGAAGGCAAGGAAGTGCGCGAATTCAACGGCCGCCACTACATTCTG GAGCAGGCCATCACGGGTGATTTCGCCATCGTCAAAGGCTGGAAGGCCGACCATTTCGGCAACGTCGTCTATCGTCATACCGCACAGAACTTCAACCCGC TGGCCGCGAGCGCCGGGCGCATCACCGTGGTCGAGGTCGAGGAGATCGTCGAGCCGGGTGTGCTGCTGCCAGAGCACATCCATACGCCCGGCATCTACGT TGACCGGGTGATCCAGGGCACCTTCGAGAAGCGCATCGAGAAGCGCACGCTCAAGGCCTGAATCGTCCCCATTCGCCCTGTTTCACACGAGGTTTTCATC
DNA Sequence for Gene
>LT40_RS11135
ATGGCACTGACCCGCGAACAAATGGCCCAGCGCGTAGCGCGCGAACTGCAAGACGGTTACTACGTAAACCTTGGCATCGGCATCCCGACCCTGGTGGCCA ACTACGTGCCGGACGGCATCGATGTGATGCTGCAATCGGAAAATGGCCTGCTGGGCATGGGCGAATTCCCCACAGAGGAAACCGTCGATGCCGACATGAT CAATGCCGGCAAGCAGACCGTGACCGCCCGCCAGGGCGCTTCTATCTTCGATTCGGCGCAGTCGTTCGCGATGATTCGCGGCGGCCACGTCGACCTCACC GTGCTCGGTGCCTTCGAGGTGGACGTGCAGGGCAACATTGCCTCGTGGATGATCCCCGGCAAGCTGGTCAAGGGCATGGGCGGGGCCATGGACCTGGTGG CGGGCGCGGAGAACATCATCGTGACCATGACTCACGCATCCAAGGACGGCGAGTCGAAACTGTTGCCCCTGTGCAGCCTGCCACTGACCGGCGCCGGCTG CATTCGCAAGGTGCTGACCGACCTGGCCTACCTGGAAATCGAGGACGGTGCGTTCATCCTCAAGGAACGGGCACCGGGCGTCAGCATCGACGAGATCAAG GCGAAGACGGCAGGCAAGTTGATCATCGCCGACGACGTGATCGAAATGCGTTTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CAACTTTCTGCCAACCCCTGCAGCTCTCTACCTATAACAACAAGGAAACACCACCATGTCCGCACAACTGGAAGAGAGCCGCTACGCTCGCTTCGCCCTG CGCTGTTCGGGCTGGGCCGAGCGCTGGTTCCCCGACTCCTACGTCTTCGCCGCGGTAGCGGTGTTGCTGGTGGCGCTGGGGGCGCTGGCCATCGGCGGCA CTCCGACGGCCACGGCAACCGCGTTCGGCGATGGATTCTGGAGCCTGATCCCGTTCACCATGCAGATGGCGTTCGTGGTGATCGGCGGCTACGTCGTAGC CAGCTCACCGCCGGCCGTGAAGCTGATCGATCGGCTGGCGCGCATCCCGCGCAACGGTCGCTCGGCCGTTGCCTGGGTGGCGCTGATATCCATGGTCGCG TCTTTGCTCAACTGGGGGCTGTCGCTGGTGTTCGGCGGGTTGCTGGTGCGCGCACTGGCGCGGCGCACCGACCTGCGCATGGACTATCGCGCCGCCGGTG
Amino Acid Sequence
>succinyl-CoA:3-ketoacid-CoA transferase
MALTREQMAQRVARELQDGYYVNLGIGIPTLVANYVPDGIDVMLQSENGLLGMGEFPTEETVDADMINAGKQTVTARQGASIFDSAQSFAMIRGGHVDLT VLGAFEVDVQGNIASWMIPGKLVKGMGGAMDLVAGAENIIVTMTHASKDGESKLLPLCSLPLTGAGCIRKVLTDLAYLEIEDGAFILKERAPGVSIDEIK AKTAGKLIIADDVIEMRF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site