Pseudomonas rhizosphaerae DSM 16299, LT40_RS00465

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas rhizosphaerae strain DSM 16299, complete genome. [Details]
DNA Sequence Upstream of Gene
ATACCGTGATTGGCAACGGCGTGAAGCTCGACAACCAGATCCAGATTGCCCACAACGTACAGATTGGCGATAACACCGCCATGGCGGCGTGTGTCGGTAT TTCGGGAAGCAGTAAGATCGGCAAGAATTGCATGCTCGCAGGCGGCGTAGGCCTGGTCGGGCACATCGAGATCTGCGATGGCGTATTCATCACTGGCATG ACCATGGTGACCCATTCGATCACCGAACCTGGGGCCTATTCCTCGGGTACGGCGATGCAGCCAGCGGCCGAGTGGCGCAAGAGCGCCGCGCGATTGCGGC AGTTGGATGACATGGCTCGGCGCCTCAAGCAGGTGGAAAAGCATGTCGAGGCAGTGACCCAAGGCGGTAAAGCGTCATCTGATGGCTGATACCTTTTCCA TATCAAGTGTGCCCAGCCGCTAGACTGCCCCTTGATTTGCAATAGGAGTGTCGCGCGTCAGCCGCGCGCTCCCTATCTTTACTACAGGCTTCCCCCCGAA
DNA Sequence for Gene
>LT40_RS00465
ATGATGGACATCAACGAGATTCGCGAATACCTGCCGCACCGCTATCCCTTTCTGTTGGTGGATCGCGTAGTGGAGCTGGACGTCGAAAGCCAGAGCATTC GCGCCTACAAGAATGTCAGCATCAACGAGCCGTTCTTCAATGGTCACTTCCCTGCGCACCCGATCATGCCAGGCGTGTTGATCATCGAGGCCATGGCCCA GGCCGCCGGCATTCTTGGTTTCAAGATGCTCGACGTCAAACCGGCCGACGGTACGCTCTACTACTTCGTGGGTTCGGACAAGCTGCGTTTCCGCCAGCCT GTGCTGCCCGGCGACCAGTTGATCCTGGAAGCCAAGTTCATCAGCTGCAAGCGCCAGATCTGGAAGTTCGACTGCAAGGCGTCGGTGGACGGCAAGCCGG TCTGCTCGGCCGAGATCATCTGTGCGGAACGCAAGCTATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTTTGATTGACCCTCGCGCCATCATCGACCCGTCCGCCGTTCTGGCAGATGGCGTCGAAGTCGGCCCTTGGTCGATCGTTGGTGCGGGCGTAGAAATCGG CGAGGGCACAGTGATCGGTCCCCATGTCATCCTCAAGGGGCCGACCCGCATCGGCAGGCACAACCGTATCTACCAGTTTTCCTCCATCGGGGAAGACACG CCGGACCTCAAGTACAAGGGCGAGGAAACCCGCTTGGTCATCGGTGACCACAACGTCATCCGCGAAGGCGTGACCATTCACCGCGGCACCGTGCAGGACC GCGCCGAAACCACGCTGGGCGACCACAACCTGATCATGGCCTATGCCCATATCGGGCACGACAGCGTCATAGGCAATCATTGCATCCTGGTCAACAACAC GGCCTTGGCCGGTCACGTGCATGTGCATGACTGGGCGATTCTGTCCGGCTTCACCCTGGTGCACCAGTATTGCCACATCGGTGCCCACAGTTTTTCCGGT
Amino Acid Sequence
>3-hydroxyacyl-ACP dehydratase
MMDINEIREYLPHRYPFLLVDRVVELDVESQSIRAYKNVSINEPFFNGHFPAHPIMPGVLIIEAMAQAAGILGFKMLDVKPADGTLYYFVGSDKLRFRQP VLPGDQLILEAKFISCKRQIWKFDCKASVDGKPVCSAEIICAERKL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site