Pseudomonas putida H, AC138_RS25910

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida strain H contig_8, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCTGACCGGTGTGGTCCGCATCACCCGCATGCGTACGTAGTCCGCCAACCGCAAGGAGTCATCATGAGCAAAACCGTCATCAACAGCGACAAGGCCCCTG CCGCCATCGGCACCTACTCGCAGGCGATCAAGGCCGGCAACACCGTGTACATGTCGGGCCAAATCCCTCTGGACCCGAAGACCATGGAGCTGGTCGAAGG CTTCGAAGCCCAGACCGTGCAGGTGTTCGAGAACCTCAAGGCCGTGGCTGAAGCTGCTGGCGGTTCGTTCAAGGACATCGTGAAACTGAACATCTTCCTC ACCGACCTGAGCCACTTCGCCAAGGTAAACGAGGTGATGGGCCGCTACTTCGAACAGCCCTACCCGGCCCGCGCCGCCATCGGCGTTGCCGCACTGCCGA AAGGCGCCCAGGTCGAAATGGACGCCATCCTGGTCATCGAATGATGCCCTGGTGACGGGCCCTGCCCGTCACCCTCCTTCCTCTGCAAGGTTACCCCGTC
DNA Sequence for Gene
>AC138_RS25910
ATGCGTCAAGCACTGCCCTTCGCGCTGGCAGCCCTGCTACTGGGCGGCTGCACCAGCCACAAACCCGAAGATTTCAACGGCATCTGGATCAACCAGGAAG CCATCACTGCGGCGGTCAAAGCCGGCAGCCTGCGCCAGGCGCTGAATGAGCACGGCCCAGTGTTCGAGTGGAAGCTCGACGTGGCCAATCAGCAAGCTAG CTATAGCAATGGTTTCGAGGCCGCCGACGGCCAGCTGAGCGCCAATGAAAAGCAATGGCAGGCCCGTTTCCAAGGCGGCCAGACCGAGCAGCTTTCGCTC GATGGCGACGAGCTGCTGGCCGTCGACCAGAACGGCACCAAGCAAACCTTCGTGCGCGCCAAGGCGCAGGCTGCAGCCAATGCACCACTGGGCAGCAGCT TCGAGAAAGCGCTTTACCAGGCCTACCTGGGTGGTAACTGGAAGATCGTCGAAGGCCAAGGCAAGGGCGCCAGCGTGCGCTTCAGCGACACCGGCAACGT CACCGGCCTACCGGGGCCGGACCGCTTCGCCCTGTGCCTGGCGGGTGATTGCGCGACCATGGGTGGCAACAATGACAGCCTGTGGCTGGAGCGCAACCAG CGTGGTGCACCGTTCATCATCAAGCGCGATGGTGACAAGCTGGAGATTTTCCAGGCAGTGAACCGTGCACAGCCGGATGAAATGCCAGAGCTGGCAGCGG GCAAGCGTCAGTGGACGCTGGAGCGCAGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GATGATGCGCGGTCCCTGTAGGATCGGGTTTACCCGCGAAGAAGACACCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCAC AGGGATCGCGCCAGCTTTTAGAAATTAAGCAAGACAATAGCTCCCACAAGGCATCGCGCCAGTTGCCAGCTAGGCTTTTCCTGCCAGGATGGCGGCGTAG CCTTCCTTGTAGCTCGGATATACCGGCGCCCAACCCAGCGCCCGCGCCCGGGCATTGCTGCAACGCTTGCTACCAGTGCGTCGCACCCGCTGCTCATCGG ACCATTCGGTAACCCCCATGTAGGCCCGCAGCCAGGCCACCACATCGGCCAGCGGCGCCGGGTCGTCATCAACGCCAATGTAGCAGTCGTCCAGAGCCTT GCCATCAGCATCGGCCTGCAGCAGAAACGCCAGCAGGCTGGCGGCATCTTCGGCATGAATGCGGTTGCCATACAGCGGCGGCTCCTCGGCAACGCGGTAA
Amino Acid Sequence
>lipoprotein
MRQALPFALAALLLGGCTSHKPEDFNGIWINQEAITAAVKAGSLRQALNEHGPVFEWKLDVANQQASYSNGFEAADGQLSANEKQWQARFQGGQTEQLSL DGDELLAVDQNGTKQTFVRAKAQAAANAPLGSSFEKALYQAYLGGNWKIVEGQGKGASVRFSDTGNVTGLPGPDRFALCLAGDCATMGGNNDSLWLERNQ RGAPFIIKRDGDKLEIFQAVNRAQPDEMPELAAGKRQWTLERS
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site