Pseudomonas putida H, AC138_RS25425

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida strain H contig_7, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CATCGCCGGCGCCACGGCGACGGTGGCGTCAGTGGCCAGCACCAGCGTGGTCAGCAGGTCGTCTGCCATGCCCTGGGCCATGCGTGCCATGAGGTCGGCG GTGGCTGGGGCGATCAGCACCAGGTCCGCCCACTTGGCCAGCTCGATATGGCCCATGGCAGCTTCGGCGGCCGGGTCGAGCAGGTCCATGTGTACGGGGT GGCCCGACAGCGCCTGCAGGGTCAGCGGGGTGATGAATTCTGCACCACCCCGGGTCATGACGACGCGCACCTGCGCGCCGTGCTCCAGGAGACGGCGAAT CAGCTCGGCGCTTTTGTAGGCGGCAATGCCGCCACCCACGCCGAGAACGATGCGCTTGCGATACAGCCGCTGCATAGGCTTGCCTTTTTCCAGTGAGAGC GGGCGACGACGTTTGAAATGCCTGCGGCGGAACGTCGCATGTACGAGGCGAAATAGATTAACACAGGGCCGAAATGGGCCGCAGCAAAGGCAGGGGTGGA
DNA Sequence for Gene
>AC138_RS25425
ATGAACATCAGGGAGTGGCCGGCGGAAGAACGGCCTAGGGAGAAGTTGTTGCAGCGAGGGGCAGGGAGCCTGACAGATACGGAGCTGCTGGCCGTTTTTC TCGGCTCAGGCGTACGTGGGTGTAATGTCGTGGAGCTTTCTCGAGGCTTGTTGGTGAAGTTCGGCAGCTTGCGCCGGTTGCTGGAGGCCGACCGCGAGGC CTTCGTCGGCGAGCTTGGGTTGGGCCCGGTGAGGTACAGCCAGCTGCAGGCACTGCTTGAGATAGGCCGCAGGCACCTTGCAACGTCGATTGAGCGGGAG TCTGCCATGGACAGCCCGGCAGCGGTGCGACGCTACTTGAAAGCCATGCTCAGGCATGAGGCCAGCGAGGTGTTCGGGTGTCTGTTTCTCGATACCAAGC ACCGGCCACTGGCATTCGAGATCCTGTTCAGGGGCACGATAGATCGGGCGAGTGTCTATCCGCGAGAGGTGGTGCGGCGGGCGCTGGTGCACAACGCTGC GGCATTGATCCTGTGCCACAACCATCCTTCAGGGATCAGTGAACCGAGTCAGGACGATGTGCATTTGACGCTGTCGTTGAAGCGGGGGCTGGCGTTGATT GATGTGCGGGTGCTGGATCACATCATCATTGGTGATGGGGAGCCGTTGTCGATGGTCGAGCATGGGTGGATTGTGGTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGGAGTACTGAGAGCCTTATAGGGTCAGTACGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGTCAACTGCCAGGCTGGCGCTACCCCTGTA GGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCTTACTTGGTCACCGTCACCTTGCTGAAATCCAGCCGCCCGAACGGGCTCACCTGGTACCCCTCGA CGCCTTGGCGCAGCAAGGTCGCCGCCGTCGGGTGCGCCAGTGGCACCCACAGCGCCTGCTGCTGGATCAGTGTCTGCGCCTGCTGGTACAGCCGGCTGCG TACGCTCTGGTCGTTGGTGGTGCGCCCGGCGCTGATCAGCTGGTCGAGGCGGCTGTCGCAGAAGCGTGCGAAGTTGGTCCCTGACTCGACCGCCGCACAG GAAAACTGCGGGCTGAGGAAGTTGTCCGGGTCGCCGTTGTCGCCCGCCCAGCCCATGAACAGCAAGTCATGCTCGCCGGCCTTGGCGCGGCGGATAAGCT
Amino Acid Sequence
>DNA repair protein RadC
MNIREWPAEERPREKLLQRGAGSLTDTELLAVFLGSGVRGCNVVELSRGLLVKFGSLRRLLEADREAFVGELGLGPVRYSQLQALLEIGRRHLATSIERE SAMDSPAAVRRYLKAMLRHEASEVFGCLFLDTKHRPLAFEILFRGTIDRASVYPREVVRRALVHNAAALILCHNHPSGISEPSQDDVHLTLSLKRGLALI DVRVLDHIIIGDGEPLSMVEHGWIVV
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site