Pseudomonas putida H, AC138_RS22850 (zipA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida strain H contig_5, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCGGCGGCGAGAAGGCACTGACCGCCTTGGCGCTGGTGTTTGCCATCTTCAAGTTGAACCCCGCACCGTTCTGCATGCTCGACGAGGTCGATGCGCCGCT GGACGATGCCAACGTCGGGCGCTACGCGCGTCTGGTCAAGGAAATGAGTGAAAGCGTGCAGTTCATCTACATCACCCATAACAAGATTGCCATGGAGATG GCGGACCAATTGATGGGGGTGACCATGCATGAACCAGGTTGTTCACGCCTTGTTGCGGTTGATGTGGAGGCGGCCATGGCCATGGTCGACGCTTGATGCA CGACGATAGGGGCACATTCTGCAGCGAAATGCCCCGCCGTGTGCGACAGACGGTGTAAAGTTGTCTTTGGTCGTGCTAGCTTAATGTCACTCGTTTTTTG CGTGGGTAAAACGCCTGTCAGAACATAGAGTTGGCGCCACGTGTTAAAGGGCTTTGAACCCTTTGTTTTCAAGCATATTTTTATAGAGGCACGGGATTAC
|
|
| DNA Sequence for Gene |
>AC138_RS22850
|zipA
ATGGAAATCGGTCTGCGCGAGTGGCTGATCCTCATCGGCATCATTGTTATCGCCGGGATTCTTTTCGACGGCTGGCGCCGCATGCGCGGCGGGAAAGGCA AGTTGAAATTCCGTCTGGATCGCAGTTATTCCAACCTGCCGGACGAAGAGGGTGGCAGTGCCGAAGTGCTCGGCCCGTCGCGAGTGCTCGATACCCACAA GGAGCCTGAGCTGGACGAAAGCGACCTGCCGTCGCTCAGCGCGTCTGCGCGTGATCGCGAGCGTGAGCCCAAGCCGGTCAAGGCCAGCAAGCGCGGCAAG CGTGCCAGTGCGGCTGCCGATGTGCACCAGGGTGACCTGAACCTGAGCGCCGAGCCGCGCGAGCCCGACCTGTTTTCCGACAGCGATGACGACTTTGCCG CCGACAACAACCGTAGCAGCGGCGCAGCGCCTGCCAGCAACAGCGTCAAGGAGTTGCCGCCTGCCGAAGAGGTGCTGGTCATCAGCGTGATCTCGCGCGA CGAGGGTGGCTTCAAGGGCCCGGCGCTGCTGCAGAACATCCTGGAAAGCGGCTTGCGCTTCGGCGAAATGGACATCTTCCACCGCCACGAGAGCATGGCT GGTCACGGCGAGGTGCTGTTCTCGATGGCCAACGCAGTCAAGCCTGGCGTGTTCGACCTGGACGACATCGATCACTTCAGCACTCGCGCTGTGAGCTTCT TCCTCGGCTTGCCGGGCCCACGTCATCCGAAGCAGGCTTTCGACGTGATGGTTGCCGCGGCACGCAAGCTGGCCCACGAACTGAACGGTGAGCTCAAGGA CGACCAGCGCAGCGTGCTGACCGCCCAGACCATCGAGCACTACCGCCAGCGTATCGTCGAGTTCGAGCGCCGTGCGCTAACCCAGAAGCGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CAGATCCAGACGAAAGAGCAGCCTGAGGGCGTGCTGGCCGGTTCGGGTATCGTCGTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGTA CATCACCGCCCTAGGGCATGTGACGCCCTTGTGGGAGCGGGTTTACCCGCGAAGAGGCTGGCACAGTCAACAGACACCTGGAACCCCACGCACCACCCCA AGCTGCTCTTTTGCTTTGCAAGAGAAGACAAATCCCATGACCGCCGAAACCCGTATCCTCGAACTGCGTGCCGAGCTCGATCAGCACAATTATCGCTACT ACGTGCTCGACGAGCCCAGCGTGCCTGATGCCGAATACGACCGCCTGTTCAACGAGCTCAAGGCGCTGGAAGCTGAACACCCGCACCTGGTAACCCCCGA CTCGCCCACCCAGCGTGTGGGTGGAGCTGCCTTGGCGGCGTTCAGCCAGGTACGCCACGAAGTGCCCATGCTCAGCCTGGGCAACGCCTTCGAAGAAGCC
|
|
| Amino Acid Sequence |
>cell division protein ZipA
MEIGLREWLILIGIIVIAGILFDGWRRMRGGKGKLKFRLDRSYSNLPDEEGGSAEVLGPSRVLDTHKEPELDESDLPSLSASARDREREPKPVKASKRGK RASAAADVHQGDLNLSAEPREPDLFSDSDDDFAADNNRSSGAAPASNSVKELPPAEEVLVISVISRDEGGFKGPALLQNILESGLRFGEMDIFHRHESMA GHGEVLFSMANAVKPGVFDLDDIDHFSTRAVSFFLGLPGPRHPKQAFDVMVAAARKLAHELNGELKDDQRSVLTAQTIEHYRQRIVEFERRALTQKR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|