Pseudomonas putida H, AC138_RS27285
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida strain H contig_49, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGCTCGTTCGCCCGGCGCGGCGATGACAGCGGCCAGGCTTCACTGGCCAAGGCAGTAGAGGCCACCCTGCAGGTGCTGGCCAACCGCATCAGTGCCTGTC ATTTGCAATTGCACCACCAGTTCGAGGACCAGCAACTGGCCATCGACCAGACCCGCCTGGAGCAGATTCTGGTCAACCTGATCGGGAATGCCCTTGACGC CATGGCCGCGCAACCGCAGCCTGAGCTATGGCTGGAAGGCGAGTTGCAGGGTGACAAGTACCGTTTGCAGGTGCGCGACAACGGCCACGGTATCGACCCC GAAGCGCGCAAGCACCTGTTCGAACCTTTCTTTACCACCAAACCGGGCGAGCATGGCCTGGGCCTGGGCCTGACCCTGTCGGCGAGCCTTGCCGCCGCCG CCAAGGGAAGCCTGAACGTCGAGCATCCCGTCACAGGCGGCACGGCCTTCGTCCTGGCCCTGCCTCTGGTTTCACCCCCTAGCGAATCGGCAGAGCATCC
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| DNA Sequence for Gene |
>AC138_RS27285
ATGAACCAAGCGCCTCTTACCGTCCTGATCGTCGAAGACGACCCGCATGTGCTGCTCGGCTGCCAGCAGGCGCTGGCCCTGGAGGATATCGCCTGCGAGG GCGTAGGCAGCGCCGAACAGGCGCTGGAACGCATCGGCGACGATTTTGCCGGCATTGTCGTCAGCGATATCCGCCTGCCGGGTATTGATGGCCTGGAGCT GCTCAATCGCCTCAAGGCCCGTGACCGCAGCCTGCCGGTGGTGCTGATCACTGGCCATGGCGATATCGACATGGCCGTTGGCGCCATGCGTAACGGCGCC TACGACTTCATGGAAAAACCGTTCTCCCCCGAGCGCCTGGTCGACGTGGTACGCCGCGCGCTGGAACAGCGCGGGCTGTCACGCGAAGTGGTGGCCCTGC GCCGCCAGCTGGCCGAACAGAGCAGCCTGGAGGGACGCATCATTGGTCGCTCACCGGCCATGGAGCACTTGCGCGAACTGATCGCCAACGTCGCCGACAC CTCAGCCAACGTGCTTATCGAAGGCGAGACCGGCACCGGCAAAGAGCTGGTCGCACGCTGCCTGCACGACTTCAGCCGTCGCCAGAGCCACCCGTTCGTG GCGCTGAACTGTGGCGGCCTGCCGGAAAACCTGTTTGAAAGCGAGATATTCGGCCACGAGGCCAACGCCTTCACCGGTGCCGGCAAACGCCGCATCGGCA AGATCGAACATGCCAACGGCGGCACGCTGTTCCTCGATGAAGTGGAGAGCATGCCGATCAACCTGCAGATCAAGCTGCTGCGCGTGCTGCAGGAGCGCAC CCTGGAACGATTGGGCTCGAACCAGAGCATCCCGGTGGATTGCCGGGTGATCGCCGCGACAAAGGCGGACCTTGATGCCCTGGGCCAGAGCGGCCAGTTC CGCAGCGACCTGTATTACCGGCTGAACGTGGTCACCCTGGAGCTGCCGCCGCTGCGTGAGCGCCGTGAAGACATCCTGCAGTTGTTCGAACATTTCCTGC AGCAGTCGGCCCTGCGCTTCGATCGGGAAACACCGACACTGGACAGCCAGACCCTGTCGCGCCTGATGGCCCACGACTGGCCAGGCAACGTGCGCGAGTT GCGCAACGTGGCCGAACGCTATGCCCTCGGCCTGCCAGCGTTCAAGAAAGGCCCCAGCGGTGGTGCCAACCAAGGCCTGCTTTTTGCCGAGGCGGTGGAA GCATTCGAACGCAACCTGCTCACTGATGCCCTGCAACGCACGGGTGGCAACCTGAGCCAGGCCAGCCAGGAGCTGGGCATGGCCAAGACCACGCTGTTCG ACAAAGTGAAAAAATACGGCCTCGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CTGAACCCAAACTGGAAAACAACGTGGACCTGGTATTCAAAGCGGCCCTGGGCGCAGGCGTGGTGCTGTTGCTGGCAGTGCTGTCGAAAACGCGCAACTA CTACATCGCAGGGCTGGTGCCGCTGTTCCCCACCTTCGCCCTGATTGCCCACTACATCGTCGGCAAGGGGCGCAGCATTGCCGACCTCAAGACCACCATC CTGTTTGGCATGTGGTCGATCATTCCGTATTTCGTGTACCTGGCAACCCTGTATGTACTGGTCGACCGCTTGCGCCTCGAGGCTTCGATGGCGCTGGCCA CAGTGGCCTGGCTGATCGCCGCGACCGTGCTGGTGACTGTGTGGGTGCGGATGCACTGAGCGAAATCGACGCCGATTCAGAGCCCTGCGATGTGCGTGAC CTCTTGCCTGTGCGCCTGCAAATAAGGCAACACCGCCCCCAGTAACGGCGCCTTGAACGGCTCCTGGAAACGGTGCGCCAGCCCCGGGATCAAGCGCAAC
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| Amino Acid Sequence |
>Fis family transcriptional regulator
MNQAPLTVLIVEDDPHVLLGCQQALALEDIACEGVGSAEQALERIGDDFAGIVVSDIRLPGIDGLELLNRLKARDRSLPVVLITGHGDIDMAVGAMRNGA YDFMEKPFSPERLVDVVRRALEQRGLSREVVALRRQLAEQSSLEGRIIGRSPAMEHLRELIANVADTSANVLIEGETGTGKELVARCLHDFSRRQSHPFV ALNCGGLPENLFESEIFGHEANAFTGAGKRRIGKIEHANGGTLFLDEVESMPINLQIKLLRVLQERTLERLGSNQSIPVDCRVIAATKADLDALGQSGQF RSDLYYRLNVVTLELPPLRERREDILQLFEHFLQQSALRFDRETPTLDSQTLSRLMAHDWPGNVRELRNVAERYALGLPAFKKGPSGGANQGLLFAEAVE AFERNLLTDALQRTGGNLSQASQELGMAKTTLFDKVKKYGLA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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