Pseudomonas putida H, AC138_RS20080

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida strain H contig_38, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGAATACCCACCATTCACTCACAAAGTACACACAACTTATCCACAGGCGCTCGCCTTGCAAAGCCCCCAATACCGCATTATCTTGTATCCCGATCGCAGC GAACCACTAGATATAGGGGTTCGTGCAAAATCACACACAAAAGTCAACCCGCAAGATCAAGCGATTTTCCGGGTGGAACTTCAGGTGATTTCAGCAGCCA AACCGCTCCTGCGGAGGCGACCGAGGCAAGCCCTTTCAGGGCGTTGTTCGGGCATGGGTGTTGCAGGCCAGGCCTGGCACCCATCAGCAACAGTTTTTGG GCTCGGCCCAGAACCTTTGACTTCGGCCAGGGAGCGGCAAGCCATTGCCCCTTATTCCTGAGTCTGTCCCGAAGTCGGTACGCCCGCGCGGGCGGATGCG CATGCATTGCGCATCCCCGCGAGGTTATCGAGCAAGTGGACGGAACGGTGGGCGCCCATAAGGCGCCTGAACAATATAGAAACTGTGGAGACACCCACCC
DNA Sequence for Gene
>AC138_RS20080
ATGCAAACCGACACGACTCGCGAGAACCCGCAGGCCCAGGTGCCGCAGGCCGCCGATTCCAACCAGGATCTGGCTGCCACCGCCCCCGGCCAACTGCGCG TGATCAAGCGTAACGGCACTGTCGTCCCTTACACCGACGACAAGATCACCGTCGCCATCACCAAGGCGTTCCTCGCAGTTGAAGGCGGCACCGCCGCCGC TTCGTCGCGCATCCACGACACCGTCGCGCGCCTGACCGAGCAGGTTACCGCAACGTTCAAGCGTCGCATGCCATCGGGTGGCACCATCCACATCGAAGAA ATCCAGGACCAGGTCGAACTGGCCCTGATGCGCGCCGGCGAGCAGAAAGTCGCCCGCGACTACGTGATCTACCGTGACCAGCGCGCCAAGGAGCGTGCCA CCCGCGCCAACACCGACGCCGTGGTCGAGCCGCACCCGAGCATCCGCATCACCCTGGCCGACGGCAGCCTGGCGCCGCTCGACATGGCCCGCCTGAACAC CATCATCAGCGAAGCCTGCGAAGGCCTGGCCGAAGTCGATGGCGACCTGATCCAGCGCGAAACCCTGAAGAACCTGTACGACGGCGTGGCCATCAAGGAC GTCAACACCGCCCTGGTGATGACCGCCCGTACCCTGGTGGAGCGCGAGCCGAACTACTCGTTCGTTACCGCCCGCCTGCTGATGGACACCCTGCGCGCCG AAGGCCTGGGCTTCCTGAATGTAGCCGACAGCGCCACCCACCACGAGATGGCTGACCTGTACGCCAAGGCCCTGCCGGCCTACGTCGCCAAAGGTATCGA GTTCGAGCTGCTGAACCCGGCCCTGGCCGACTTCGACCTGGAAAAACTGGGCAAGGCGATCAACCACGAGCGCGACCAGCAGTTTACCTACCTGGGCCTG CAGACCCTGTACGACCGCTACTTCATCCACAAGGATGGCGTGCGCTTCGAGCTGCCGCAGGTTTTCTTCATGCGTGTGGCCATGGGCCTGGCGCTGGAAG AAAAAGACAAGGAAGCCCGTGCGATCGAGTTCTACAACCTGTTGTCGTCGTTCGACTACATGGCCTCGACCCCGACCCTGTTCAACGCCGGCACCCTGCG CCCGCAGCTGTCCAGCTGCTACCTGACCACCGTGCCGGACGACCTGTCGGGCATCTACCACGCGATCCACGACAACGCCATGCTGTCGAAATTCGCCGGT GGCCTGGGCAACGACTGGACCCCTGTGCGCGCACTGGGCTCTTACATCAAGGGCACCAACGGCAAGTCGCAGGGCGTCGTACCGTTCCTGAAAGTGGTCA ACGACACCGCCGTTGCGGTCAACCAGGGTGGCAAGCGCAAAGGCGCTGTATGTGCCTACCTGGAAACCTGGCACCTGGACATCGAAGAATTCATCGAGCT GCGCAAGAACACCGGTGATGACCGCCGTCGTACCCACGACATGAACACCGCCAACTGGATCCCTGACCTGTTCATGAAGCGTGTCTTCGATGACGGCAAG TGGACCCTGTTCTCGCCTTCGGAAGTGCCAGACCTGCACGACCTGACCGGCAAGGCCTTCGAAGAGCGCTACGAGTACTACGAAGCCCTGACCGAGTACA ACAAGATCAAGGTGTTCAAGACCGTTCAGGCCAAAGACCTGTGGCGCAAGATGCTGTCGATGCTGTTCGAGACCGGCCACCCATGGCTGACCTTCAAGGA CCCGTGCAACCTGCGTTCGCCGCAGCAGCACGTGGGCGTGGTCCACAGCTCGAACCTGTGCACCGAAATCACCCTGAACACCAACAAGGACGAGATCGCG GTCTGCAACCTGGGCTCGATCAACCTGCCGAACCACATCGTCGATGGCAAGCTGGACACCACCAAGCTGCAACGCACCGTGAACACCGCCGTGCGCATGC TCGACAACGTGATCGACATCAACTACTACTCGGTGCCGCAAGCGCGTAACTCGAACTTCAAGCACCGGCCGGTCGGCCTGGGCATCATGGGCTTCCAGGA TGCGCTGTACCTGCAGCACATTCCTTACGGCTCCGATGCTGCCGTCGAGTTTGCCGACAAGTCGATGGAAGCGGTCAGCTACTACGCCATCCAGGCTTCG TGCGACCTGGCCGATGAACGCGGCGCCTACGAGACCTTCCAGGGTTCGCTATGGTCCAAGGGCATTCTGCCGCTGGATTCGCAACAGATCCTGATCGAGG CCCGTGGCCAGAAGTACATCGACGTCAACCTGGAAGAAACCCTGGACTGGGCGCCGGTACGTGCCCGCGTACAGAAAGGTATTCGTAACTCGAACATCAT GGCCATCGCGCCAACCGCGACCATCGCCAACATCACCGGCGTGTCGCAGTCGATCGAGCCTACCTACCAGAACCTGTACGTGAAATCGAACCTGTCGGGC GAATTCACCGTGATCAACCCGTACCTGGTTCGCGACCTCAAGGCCCGCGACCTGTGGGACTCGGTCATGATCAACGACCTGAAGTACTACGACGGTTCGG TACAGCAGATCGAGCGTATCCCGCAAGAGCTGAAAGACCTGTACGCCACTGCGTTCGAAGTCGAGACCAAGTGGATTGTCGACGCTGCTTCCCGTCGCCA GAAGTGGATCGACCAGGCGCAGTCGCTGAACCTGTACATCGCGGGTGCATCGGGCAAGAAGCTGGACGTGACCTACCGCATGGCCTGGTACCGTGGCCTG AAAACCACCTACTACCTCCGTGCCCTGGCCGCCACCAGCACCGAGAAGTCGACCATCAACACCGGCAAGCTCAACGCCGTTTCCAGCGGTGGCGACAGCG CCCCAGTCCAGGCAGCCGGCCCTGCGCCAGTGCCAAAGGCCTGCGCGATCGACGAGCCTGACTGCGAAGCCTGCCAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGCCTGAATGCCGTGCGGGGTGCCTACGGGTGCCCCGCGCGGCATTTTTGTATCCGCGCCTCAGAGAAACCTTGCCCTTTGCCCACTGTTCACGCAGCTC GGTAAAAGAACAGGACCTCTCAAAAAAGGATGTACGCCCATGGCGCGGAAAAAACTGGCATCTCGCAAGATTGGTCGCAACGCAGAAACCGGCCGTTTCA CCTCGGTGGAACAGGCACGCAAGCACCCCAAGACACACATTGTCGAAACGCTGTACACCCACCGTAGCTAGTGGTGGCTGGCCTCATCGCCGGCAAGCCC ACGGTGAGGCCGACTCCGCCAACACAAGCCTCAGGAAACACCATATGATGTGCCTTCAAATTTAAACTGGCACAACATATAGGTTGGCGCTACACTCTCC CCCCGTAGAAGAAGCCACCCGCTTCGTGAACGGACGCACGCCAAACCGGTCAAAAAAGTTACCCTCGCCGGCAAGACACGCGCCCCGATCGAAGGTGAAT
Amino Acid Sequence
>ribonucleotide-diphosphate reductase subunit alpha
MQTDTTRENPQAQVPQAADSNQDLAATAPGQLRVIKRNGTVVPYTDDKITVAITKAFLAVEGGTAAASSRIHDTVARLTEQVTATFKRRMPSGGTIHIEE IQDQVELALMRAGEQKVARDYVIYRDQRAKERATRANTDAVVEPHPSIRITLADGSLAPLDMARLNTIISEACEGLAEVDGDLIQRETLKNLYDGVAIKD VNTALVMTARTLVEREPNYSFVTARLLMDTLRAEGLGFLNVADSATHHEMADLYAKALPAYVAKGIEFELLNPALADFDLEKLGKAINHERDQQFTYLGL QTLYDRYFIHKDGVRFELPQVFFMRVAMGLALEEKDKEARAIEFYNLLSSFDYMASTPTLFNAGTLRPQLSSCYLTTVPDDLSGIYHAIHDNAMLSKFAG GLGNDWTPVRALGSYIKGTNGKSQGVVPFLKVVNDTAVAVNQGGKRKGAVCAYLETWHLDIEEFIELRKNTGDDRRRTHDMNTANWIPDLFMKRVFDDGK WTLFSPSEVPDLHDLTGKAFEERYEYYEALTEYNKIKVFKTVQAKDLWRKMLSMLFETGHPWLTFKDPCNLRSPQQHVGVVHSSNLCTEITLNTNKDEIA VCNLGSINLPNHIVDGKLDTTKLQRTVNTAVRMLDNVIDINYYSVPQARNSNFKHRPVGLGIMGFQDALYLQHIPYGSDAAVEFADKSMEAVSYYAIQAS CDLADERGAYETFQGSLWSKGILPLDSQQILIEARGQKYIDVNLEETLDWAPVRARVQKGIRNSNIMAIAPTATIANITGVSQSIEPTYQNLYVKSNLSG EFTVINPYLVRDLKARDLWDSVMINDLKYYDGSVQQIERIPQELKDLYATAFEVETKWIVDAASRRQKWIDQAQSLNLYIAGASGKKLDVTYRMAWYRGL KTTYYLRALAATSTEKSTINTGKLNAVSSGGDSAPVQAAGPAPVPKACAIDEPDCEACQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site