Pseudomonas putida H, AC138_RS15255
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida strain H contig_27, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGGAGGGCGGCATCGGCCTTTCCGGCGGGCAACGCCAGCGCCTGGCGATTGCCCGGGCCTTGCTGGTCGATGCGCCGATCCTGTTGCTGGACGAAGCCAC CAGTGCCCTTGATGCACAAAGTGAATACTTGATCCAGCAAGCGCTGCCCAGCCTGATGGCCGGCCGTACCACGCTGGTGATCGCCCATCGCCTGGCCACG GTACAGCATGCCGAGCGCATCGCGGTCATCGACCAGGGCCGGCTGGTGGCGGTGGGCACCCACCGTCAGTTGATTGAGGACAGCCCGTTGTATGCGCGGC TGGCAGCGCTGCAATTCACCACGGGCTAGCGTGTCGTGGCCTTGTAACATTTCTGTAGTAATTGCCTGAGAAGATTTGCCTCAACTGTTGCGTAAGTGCT CGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGCTGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCG
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| DNA Sequence for Gene |
>AC138_RS15255
ATGTTGCGTAAATCCCTCAGAGTGCAAATTCTCTCGCTGCTCGGCGGCAGTGTGCTGGCGATGCTGCTGATCGCCCTGGTGTGTTTCCAGTTCCTGTCGT CCAGCGTGCGTGGCTACGCCGAGCTGGTCGACGGGCCGCTGCGGGCCTCGCAATTGATTGACGAAGCCAACCTGCAGTTCAAGATCCAGGTGCAGGAATG GAAGAACGTGCTGTTGCGAGGGCGCCAGCCTGCGGAAATGGACAAGTACTGGCAGCAGTTCCAGGCCCGAGAACAGCAAGTTCAACAACTGCTCGGGCAA TTGATCGACAACAGCGATGCCAGGCTCAAGGCGTCGCTGCAGCAATTGCGCGACAGCCACCGCCAGTTGGGCCAGGCCTATGCACAAGGCCGCCAGGCGT TCCTGGCGGCAGGCGGCGACCCGGTAGCGGGCGACCGGGCGGTCAAAGGCGTGGACCGTGCCGCCAGTGAGCAAATGAGCGAACTGGTCGAGCAACTGCG CGCCGATGCTCGCCAGCGTGCAGCCAGCATCAATGCCAGTGCCGAGCGCACGGTATGGTTGGGCCTGCTGGTGATGCTGGCTTCAGCGGTGCTGGTGGGG CTGCTCAGCCTGTGGCTGGTCAACCGTAGCCTGATCGAGCCGATCCGCCAGTTGATCGAGTACGTCGCGCAGCTCAGCCAAGGCAGCTTTGCTGCCCGGG TCGACAGCCGTCGGGAGGATGAGCTGGGGCGCCTGGCGCGGGCGGCCAACACCCTGCGTGACTTCCTTGCCGATACCGTCGGCCGGCTGCAGGACAACGC TCAGGAGCTGGAAGGTGCCAGCGGCCAGTTGCGCAGTATTGCCGGTGACATGGCCCGCGGTACTCATGACCAGTTCCAGCGTACCGACCAGGTAGCCACG GCCATGCACGAAATGTCCGCCACTGCCCAAGAGGTCGCTCGCCACGCTGCCGAGGCGGCCCGCGCGGCCGATGACGCCGACCACAGCGCCCAGGCCGGCG AGCAGGTGATGCAGCAGACCATCGACATCATCGGGCTGGTCAACCGCGAAATCGCCGGCACGGCAACGGTAATTCGCGATCTGGAGCATGACAGCACACG GATAGGCAAAGTGCTGGAAGTGATCCGCGGCATTGCTGAACAGACCAACCTGCTGGCGCTTAACGCGGCCATCGAAGCGGCCCGTGCTGGCGAAGCCGGG CGTGGTTTTGCGGTGGTCGCCGATGAAGTGCGTAGCCTGGCCCAGCGCACGGCAGCGTCGATTGCAGAAATTCACCAGATCATCGAAGCGGTACAGTCAG GGGCTGTGGAGGCGGTCAAGGCCATCGAAAGTGGCCAGCAACGTAGCCAGGAAGGGGCTGAGCAAGTCGAGCAGGCCGGGCAGATGCTGCAACGTATCAC GCAGGCGGTGGAAGCGATCCGCGACATGAACCGGCAGATCGCCACAGCGGCCGAGGAGCAGACCAGCGTGGCCGAAGATATCTCGCGCAACCTGATCGAA ATTACCCGAATTGCCACGGCCAACCAGGAAGCGGTGCAGCATACCGAGCAGGCGGGGCAGCGCCTGCATGGTTTGTCAGGGCAGTTGGGCGAAGTCACCT CCCGCCTGAGTGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CTCGGTCTGCAGGAGTTGCAGGTGCCATAGAGGCTGAAGCCGCGCACTGACGTATTTTTCGCACACAACACAAAGCCCGCACATGGCGGGCTTTGTGACA AGGATTTGGTCGGAGAGACAGGATTCGAACCTGCGGCCTTCTCGTCCCGAACGAGACGCGCTACCTGGCTGCGCTACACTCCGATGAACAAAATCCTACT GCATCCCGTTTTTGCTCGCAAGCCCTTGTTGTTTAAAGGGCCATAGCCTGAACGGGGCCTTGATCAGAGCTCTTTGACGGTGCGGATCTGGTCCTTGTTC AGGCGTGTGCGCTTGCCGTCGAGTTGCTCGAATTCATAGAAGCCAGAGTCTTCATCGTAGGACGGTTTGTCGGTTGCCTGGATCTCCCGGCCATCGTTCA GGGTAATGACGGTTGGGGTCGAGCAGCCAGCAAGGGCGCCCAAACCCAAGGCAAGCAGGAAGGCGGGTAGGGTCCGTTTGATCATCGTGTTTCTCCAAGT
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| Amino Acid Sequence |
>chemotaxis protein
MLRKSLRVQILSLLGGSVLAMLLIALVCFQFLSSSVRGYAELVDGPLRASQLIDEANLQFKIQVQEWKNVLLRGRQPAEMDKYWQQFQAREQQVQQLLGQ LIDNSDARLKASLQQLRDSHRQLGQAYAQGRQAFLAAGGDPVAGDRAVKGVDRAASEQMSELVEQLRADARQRAASINASAERTVWLGLLVMLASAVLVG LLSLWLVNRSLIEPIRQLIEYVAQLSQGSFAARVDSRREDELGRLARAANTLRDFLADTVGRLQDNAQELEGASGQLRSIAGDMARGTHDQFQRTDQVAT AMHEMSATAQEVARHAAEAARAADDADHSAQAGEQVMQQTIDIIGLVNREIAGTATVIRDLEHDSTRIGKVLEVIRGIAEQTNLLALNAAIEAARAGEAG RGFAVVADEVRSLAQRTAASIAEIHQIIEAVQSGAVEAVKAIESGQQRSQEGAEQVEQAGQMLQRITQAVEAIRDMNRQIATAAEEQTSVAEDISRNLIE ITRIATANQEAVQHTEQAGQRLHGLSGQLGEVTSRLSA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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