Pseudomonas putida H, AC138_RS14715
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida strain H contig_25, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCCTGATCTGGGCTGGGTCAAGCAGACCCTGCGTTCCACGGGTGACGTCAAGCAGTCCAACCTGATCCGCCAGCCAGATGGCAGCGTGGCATTCCTGGTC GACTTCGCCGGCCCGGCGCTTGCCGCCCTGCCGGAAGACGCCGCCGTGCGCAGCCAGATCAGCGTGGGCGACAACGCCGAGGTGGTCGAGAACAATCTGC GCTATAACCCTGAGACCAAGGGCTGGCGCCTGACCCTGCGCCTGAAGGTCAAGGAAGCCAACAAGTCGACCGAAATGCGCGCCGCACTGGTGCGTGATGT ACCGGTCGAGCCTGCCAAGCCTGCCCAGGACGCCAAGCAGGACAAGGCCGCAGCCAAGCATGCCAAGGCCGAGAAAGCCGTCAAGGCTGAGCAATCTGCC AAGGCCGAACAACCTGCCGCCGATGCGGCGCCCACCAACGGGGCCCTGGCCACCACCGAGAAGGTGCTGACCGAGACCTGGAGCTATCAGTTGCCTGCCG
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| DNA Sequence for Gene |
>AC138_RS14715
ATGAGTAACTCAAGCGCAAGGCCGGAATCGCTTGGCGAGTACCTGGCCCACCTACCACTGAGCGACGAGCAGCGGGCTGAGCTTGCCAGCTGCACCTCGT TCAGTGAGCTACACCAACGCTTGGCGGCCAACCCGGCCGCCAGCTCTGCCGAGGCCGTGCAGGCCTCGGTGGGCCCGCGCCTGACCGTGGGCAGCGCCGC CGAGCTGGAAGAAGCCGAAATGCTCGGCGTCGACGGCAGCGGCCGCCTGTGCCTGAAGATCGCCCCGCCGATCAAACGCACCAAGGTCGTGCCCGAGCCA TGGCGCACCAATGTGCTGATCCGCATGTGGCGACGCATGACCGGCCGCCCCAATGCCCCGCAGCCGCCCAAGCGCGAGCTGCCGCCGGCCCGCTGGCGCA CGGTCGGCTCTATCCGCCGTTACATTCTGCTGGCGCTGATGATCGGCCAGACCATCGTCGCTGGCTGGTACATGAAAGGCATCCTGCCGTACCAGGGCTG GTCGTTCGTGGACTTTGACGAAATCGTCAACCAGCCGCTGTGGGACACGGTGGTGCAGGTGTGGCCGTATGCCCTGCAAACTTCCATCCTGATCCTCTTC GGCATCCTGTTCTGCTGGGTGTCGGCGGGCTTCTGGACCGCGCTGATGGGCTTCCTCGAGCTGCTCACCGGGCGTGACAAATACAAGATTTCCGGTAGCA GCGCAGGCAACGAGCCGATCGCGCCCGAGGCGCGTACCGCGCTGGTGATGCCGATCTGCAACGAAGACGTGCCGCGGGTGTTCGCCGGCCTGCGCGCAAC GTTCGAGTCGGTGGCCGCCAGCGGCAACCTCGACCGGTTCGACTTCTTTGTGCTCAGCGACACCAACGACACCGACATTGCCGTGGCCGAGCAACAGGCC TGGCTGGATGTGTGCCGTGAAACCAAAGGCTTTGGCCGCATCTTCTACCGCCGCCGTCGGCGCCGTGTGAAGCGCAAGAGCGGTAACCTCGACGACTTCT GCCGTCGCTGGGGTGGCGAGTACAAGTACATGGTCGTGCTCGACGCCGACAGCGTCATGAGCGGCGAGTGCCTGAGCAGCCTGGTGCGCCTGATGGAGGC CAACCCGGACGCCGGCATCATCCAGACCGGGCCGAAAGCCTCGGGCATGGACACCCTGTATGCACGCATGCAGCAGTTCGCTACCCGCGTGTACGGCCCA CTGTTCACTGCCGGTCTGCACTTCTGGCAGTTGGGTGAGTCGCACTACTGGGGCCACAACGCGATCATCCGCATGAAGCCGTTCATCGAGCACTGCGCCC TGGCGCCGTTGCCGGGCAAAGGCGCGTTCGCCGGTGCCATCCTTTCCCACGACTTCGTCGAAGCTGCGCTGATGCGCCGTGCCGGCTGGGGTGTGTGGAT TGCCTACGACTTGCCGGGCAGCTACGAAGAACTGCCGCCAAACCTGCTTGACGAGCTCAAGCGCGACCGCCGCTGGTGCCACGGCAACCTGATGAACTTC CGCCTGTTCCTGGTCAAGGGCATGCACCCGGTTCACCGTGCGGTGTTCCTTACCGGGGTGATGTCTTACCTGTCGGCGCCGCTGTGGTTCCTGTTCCTGG TGCTGTCGACCGCGCTGCTGGCAACCAACACGCTGATGGAGCCACAGTATTTCATCGAGCCGTACCAGCTTTACCCGCTGTGGCCGCAGTGGCACCCGGA GAAGGCTGTGGCGCTGTTCTCCACCACCATTGTGCTGCTGTTCCTGCCCAAGCTGCTCAGCGTCATCCTGATCTGGGCCAAGGGCGCCGTCGAGTACGGT GGACGCGTCAAGGTCACCTTGTCGATGCTGATGGAGATGCTGTTCTCCATGTTGCTGGCACCGGTACGCATGATCTTCCACACCCGCTTCGTGCTGGCCG CATTCCTCGGCTGGGCTGCGACCTGGAACTCGCCGCAGCGTGACGACGACTCCACGCCGTGGGGCGAAGCGGTGCGCCGGCATGGCCCGCAGACGCTGCT GGGCATTGCCTGGGCCGCACTGGTGGCGTGGTTGAACCCGAGCTTCCTGTGGTGGCTGGCGCCTATCGTCGGTTCGCTGGTGCTGTCGATCCCGGTATCG GTGATTTCCAGCCGCACCCGCCTGGGCCTGGCGGCCAAGGACGAGAAGCTGTTCCTTATCCCAGAGGAATACGCCACGCCACAAGAGCTGTTGGCTACCG ACCAGTACACCCACGAAAACCGCTGGCATGCCCTGCATGATGGCTTCGTGCGGGCCGTGGTCGACCCGCGGCAGAATGCCCTGGCCTGTGCCATGGCCAC TGCCCGCCATGGCCAGGCGGCACCGATCGAAGCGTTGCGTGCCGAGCGCGTTGCCAAGGCGATTGAAGTCGGGCCGAAAGGCCTGGACCTCAATACTCGC CTGGCTCTGCTCAGCGACCCGGTGGCACTGAGCCGCCTGCACGAGCAGGTGTGGGCCGAGCACAATGCGGCATGGATCGATGTGTGGCGTGCGTCGATCA ACAATGACCCGCATTCGCCGCTGTTGCCGTTGCACCCTGAAAACGCAGGCCAACCGAGCCTCGTCGGCGCTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCGGGTCTGTTCGCGGCGGTTCGGCGCCCCGATGAACCCGCCCTACGGGGCGCATGACCGGGCCTCTTCGCGGGTGAACCCGCTCCTACCAGGGATACAC ATGCCCTTGTAGGAGCGGGTTCACCCGCGAAGCTTTTTGGCCTAACCCCCTCATTTTGGCCAACAAAGTCCCCCTGCGGCTCTAGGTCCACGGGCCGCCA TGCGTTAGCATCCCTCTCCGATACGACGCTTCGGCCAGTACGGCCGTGCCAACACAATAAGATTCGCTACTTTTCTTGCTAGGGGACTTGGTGATGATCA AGAAATACCTTTCGCGACTGCTGGTCGGTGTGACCGCCCTGGTCGCCGTGACCGCGGCCCAGGCGGGCGCCATCGACGACGCGGTCAAGCGTGGCACCCT GCGGGTGGGCATGGACCCGACTTACATGCCGTTCCAGATGACCAACAAACGTGGCGAGATCATCGGCTTCGAAGTCGATATCCTCAAAGCCATGGCCAAG
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| Amino Acid Sequence |
>glucan biosynthesis protein H
MSNSSARPESLGEYLAHLPLSDEQRAELASCTSFSELHQRLAANPAASSAEAVQASVGPRLTVGSAAELEEAEMLGVDGSGRLCLKIAPPIKRTKVVPEP WRTNVLIRMWRRMTGRPNAPQPPKRELPPARWRTVGSIRRYILLALMIGQTIVAGWYMKGILPYQGWSFVDFDEIVNQPLWDTVVQVWPYALQTSILILF GILFCWVSAGFWTALMGFLELLTGRDKYKISGSSAGNEPIAPEARTALVMPICNEDVPRVFAGLRATFESVAASGNLDRFDFFVLSDTNDTDIAVAEQQA WLDVCRETKGFGRIFYRRRRRRVKRKSGNLDDFCRRWGGEYKYMVVLDADSVMSGECLSSLVRLMEANPDAGIIQTGPKASGMDTLYARMQQFATRVYGP LFTAGLHFWQLGESHYWGHNAIIRMKPFIEHCALAPLPGKGAFAGAILSHDFVEAALMRRAGWGVWIAYDLPGSYEELPPNLLDELKRDRRWCHGNLMNF RLFLVKGMHPVHRAVFLTGVMSYLSAPLWFLFLVLSTALLATNTLMEPQYFIEPYQLYPLWPQWHPEKAVALFSTTIVLLFLPKLLSVILIWAKGAVEYG GRVKVTLSMLMEMLFSMLLAPVRMIFHTRFVLAAFLGWAATWNSPQRDDDSTPWGEAVRRHGPQTLLGIAWAALVAWLNPSFLWWLAPIVGSLVLSIPVS VISSRTRLGLAAKDEKLFLIPEEYATPQELLATDQYTHENRWHALHDGFVRAVVDPRQNALACAMATARHGQAAPIEALRAERVAKAIEVGPKGLDLNTR LALLSDPVALSRLHEQVWAEHNAAWIDVWRASINNDPHSPLLPLHPENAGQPSLVGA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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