Pseudomonas putida H, AC138_RS13230

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida strain H contig_24, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTCGCTGGGCAAGCAGCCCAAGGGCGCCAAGGAACGCGAAGGCGACAAGAAAACCCCCGAGGGCTTGTACTGGCTGGACTGGCGCAAGCAGAGCGACCGC TTCAACCTGGCCATGCACATCAATTACCCGAACATCAGCGATGCCGCCCGCGCGACCCGGGCAGGGGTGAATGCCGGCAGCATGATCATGATTCACGGCA CGCCGATCAACGATGAATACCCGGAATGGTACTTCCATACCCTGGACTGGACGGATGGTTGCATTGCCATGCGCAACCGCGACATGCAGGAAGTGTGGGA CCTGGTTCGGGATGGAACGCTGATCGAGATCCGCCCTTGATATAGAGCCTTCCGGCAAAAGTTGTAGGAACCTTCTCACCATTTAGCGCGAACTTGCCTG ACAGGTGCTTAGGCAGGGTACTGCATCCATACGAGTGGCTTAATTTCTAGCATCCACGCAGACGAGTACGAAAACCGTACATCATTTGCGGGGTGCTTCA
DNA Sequence for Gene
>AC138_RS13230
ATGCCGTGCCTGATTCACCGCATCGCCCATTGGCTGTCGGCCGGTTGCCTTTCTGGCTTGCTGTCCATTCCCCAGGTGCTGGCCGACGACCCTGCCAGCC AGCAGTTGCGCGATCAACAGCATGGGCTGCGGCAACTGGAGCAACAGCAGCGGCTGGAACGCTGGCAGCGTATACCCGTCCCGGCTGAACCGACCAACAG CACTTCCCACCGCCCGCACGATGATCGCTGCTGGGCAGTCGATGGCGTGCGCGTGGCGGGCATGCACCGGCTTTCGAACTCGGCACTGGCGCCCACCATC CGTGCCCTCACGCCTGCCTGCATGGGCATCGCCGACATCAACCGGCTGCTCAAAGCCATCACCCAACGTTATGTACAAGCCGGCTACCCAACCAGCCGCC CCTACCTGCGCCAGCCCCCAGCAGAGGGCATGCCGTTGGACATCGTCATTGTCGAAGGCTTTGTCGAAACCATCGAACTGGCTGGCCCCGACCTACCCCT GTCTCTCTCCAGTGCCTTCCCAGGCCTGCTTGGGCAGCCACTGTACCTGCCCGACCTTGAGCAAGGCCTGGACCAGCTCAACCGCCTTCGCGCCTATGAA CTGGGCGCCACCTTGCTGCCCGGCGAACTGCAGGGCGGCACCCGCGTGGTCGTGCAGCCGGGCAAGGTTGCTTCACGCTGGCACCTGGACAGCCGCTTCG ACAACCGGGGCAGCGAGCTGACCGGCCGCCACCGCGTCAACCTCGGCATTGGCCTGGACAGCCCGCTTGGCCTCAATGATGAGCTGCGCCTGTCGTTGGC CCGCACGGTGCTCGATACGCCCGGCCAAAGCCAAGGGATATCGTTGTACTACAGCATCCCCTACGGCGCCTGGACCTTTGCCCTCAGCGCCAGCCAGCTA AGCTATCAAGCCCCCCTCCCCTACAGCGACAAGGCTGCCGACGGCAGCAGCAGCTATCAGGGCCTGAGTGTCGAGCGGGTATTGTGGCGCAACCAGCAAG GCATGCTCAGCGCCAGCGCCCGTCTGGACCGCAAGCAGCTGATCAACCGCAGCGCTGGCGCGGTTATCGTCCAGCAGAGCCCGACGCTGGCCACGGTAGA GGCCGGCATCAACCTGCTGTGGCTCGAAAGTGGCCTGTGGAACGGTTACTTCGGCGTTGCCCAAGGCATTGACGCATTGGGTGCCGACCGCTCGCCCCTG GGTGCTCATCGCCTGCGCCCGGACTTTCGCAAGTACCGCGCCAACCTGCTGCACCTGCGTCAAGGCCCGGCACCCAGCCCTTGGCGCTGGCAGAGCGAGC TGGCCATGCAGTACAGCCGTGACCCGCTGCCTGCCGTCGAACAGCTGCTGGTCAGCGACGATTCGGCTGTCCGCGGCTTTCGTCTGCACACTTACTCCGG TGCCAGCAGCGCCGTCTGGCGCAATACGTTCAGCCAGGCGCTGCCACGGACCTGGGCCCCACCTTTCGAGATACGCCCCTACATCGGCCTGGACCTGGGC TGGGTTCGCACCGCCGAAGGCAAACCGTCACAGCGCCTGGCCGGGGCCGCCGCAGGGTTGGAACTGAGCCTGCCCGGCAGCCGCCTGCGCCTGGACTACC AACGCGCCTTGTACACCAGCGACCTGCCCCGCCCGCGGCTGGAGCCCGGCTTCTGGGTGCTGGACTGGACCCTGAGCATCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TTCACCCACAACAAAGAGAACGAGAAAATGCAAACACTCTCGCAGTTACCGCCTGTTCGCCCGGATACCTTGCGCTGGGCAATCTTCCTCGCCGTGCTCG GGCCCAGCGCCGCACTGGCTCAGACAGGACTGGAAGCAGCCAGCGGCCCCGGGGGGACCCCGGTCATCCATAACGGCCACGGGGTGCCGGTCATCGACAT CGTGCCGCCCAACGCCACGGGGCTGTCACACAACCAGTTCATCGACTACAACGTTGCCACCCCGGGCCTGGTGCTGAACAACGCCACCGCAGCCGGGCAG TCGCAACTGGCCGGCGCCCTGGCGGCCAACCCGCAGTTCCAGGGCCAGGCCGCCTCGACCATTCTTAACGAAGTGATCAGCCGCAACGCCTCGCTGATCG AGGGGCCGCAGGAAATCTTCGGGCGCCCGGCCGACTACATACTGGCCAACCCCAATGGCATCACCCTCAATGGCGGCAGTTTCATCAACACCACCCGCGC
Amino Acid Sequence
>TPS family activation/secretion protein
MPCLIHRIAHWLSAGCLSGLLSIPQVLADDPASQQLRDQQHGLRQLEQQQRLERWQRIPVPAEPTNSTSHRPHDDRCWAVDGVRVAGMHRLSNSALAPTI RALTPACMGIADINRLLKAITQRYVQAGYPTSRPYLRQPPAEGMPLDIVIVEGFVETIELAGPDLPLSLSSAFPGLLGQPLYLPDLEQGLDQLNRLRAYE LGATLLPGELQGGTRVVVQPGKVASRWHLDSRFDNRGSELTGRHRVNLGIGLDSPLGLNDELRLSLARTVLDTPGQSQGISLYYSIPYGAWTFALSASQL SYQAPLPYSDKAADGSSSYQGLSVERVLWRNQQGMLSASARLDRKQLINRSAGAVIVQQSPTLATVEAGINLLWLESGLWNGYFGVAQGIDALGADRSPL GAHRLRPDFRKYRANLLHLRQGPAPSPWRWQSELAMQYSRDPLPAVEQLLVSDDSAVRGFRLHTYSGASSAVWRNTFSQALPRTWAPPFEIRPYIGLDLG WVRTAEGKPSQRLAGAAAGLELSLPGSRLRLDYQRALYTSDLPRPRLEPGFWVLDWTLSI
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site