Pseudomonas putida H, AC138_RS12465

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida strain H contig_24, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ATCTGCCGAGCAGGTGGTTGCCCTGATCAAGGCCGAACAGGCCAAAGGCATCGACCTGACGCGGATCTTCCTGGCCGGCTTCTCCCAGGGCGGCGCGGTG GTGCTGCACACTGCCTATATAAAGTGGCAGGAAGCACTGGGCGGGGTGATCGCCCTGTCCACCTATGCCCCCACCTTCAATGACCAGCACCAGTTGAGTG CCTGCCAGCAACGCACCCCGGCCCTGTGCCTGCATGGCGTGCATGACTCGGTGGTCATCCCGTCCATGGGCCGTACCGCCTTCGAGTACCTGAACACCTG GGGCGTCGCTGCCCGCTGGTACGAATACCCGATGGAACACGAAGTGGTGGTCGAAGAACTGAACGATATCCACGACTGGCTGAGCAAGCAGCTGCAATAG GCAGCCTCGCTTGTAGTTGTGGGCGTATTCCGCTACGCCGCGCCCGGATCTTGCATTACACTGCCCGGCGTACATTCCTTAATCAGTTGATGAGACGACC
DNA Sequence for Gene
>AC138_RS12465
GTGCTCAAAGCACTCAGAAAAATATTCGGCAAGGGAGAGGCCGCACCACAAGCCGCCGCTCCTGCTGCCAGCGTGACGCCGGAAGCCCGGCCCGCGGCAA AACCGGCCGCACCCCATGCCAACCCCGCCCCCAAGGCTGAGCAACCTGCCGCCGCGACGCCACCTGCCGATCAACCGGCCAAGGACAAACCGCGCCGCGA ACGCAAGCCCAAGCCACAGGCCAGCCTGTGGAAGCCCGAAGACTTCGTGGTCGAGCCGCAGGAAGGCAAAACCCGCTTCCACGACTTCAAGCTGTCCAAC GAGCTGATGCACGCCATCCACGACCTGGGCTTCCCGTACTGCACGCCGATCCAGGCGCAGGTCCTGGGTTACACCCTGCGTGGCCAGGACGCCATCGGCC GGGCCCAGACGGGCACCGGCAAGACGGCCGCCTTCCTGATCTCGATCATTTCCCAGTTGCAGCAGACGCCACCGCCTAAAGAGCGCTACATGGGCGAGCC GCGGGCGCTGATCATCGCCCCCACCCGCGAGCTGGTGGTGCAGATCGCCAAGGACGCCGCTGCCCTGACCAAGTACACCGGCCTGAACGTGATGAGCTTC GTCGGTGGCATGGACTTCGACAAGCAGCTCAAAGCCCTGGAAGCGCGCCACTGCGATATTCTGGTGGCTACGCCGGGCCGCCTGCTGGACTTCAACCAGC GTGGTGAAGTGCACCTGGACATGGTCGAGGTGATGGTGCTTGACGAAGCCGACCGTATGCTCGACATGGGCTTCATCCCCCAGGTCCGCCAAATCATTCG TCAGACACCGCCTAAAAGCGAGCGCCAGACCCTGCTGTTCTCCGCCACCTTCACCGACGATGTGATGAACCTGGCCAAGCAGTGGACCACCAACCCGGCC ATCGTCGAGATCGAGCCGGAGAACGTGGCCAGCGAAACGGTGGAGCAGCACGTGTATGCGGTGGCCGGCAGCGACAAGTACAAACTGTTGTACAACCTGG TGACCCAGAACAAGTGGGAACGGGTGATGGTGTTCGCCAACCGCAAGGACGAAGTGCGGCGCATCGAGGAAAAGCTGGTACGCGACGGTATCAATGCGGC CCAGCTGTCGGGCGACGTGCCGCAGCACAAACGCATCCGAACCCTGGAGAGCTTCCGCGAAGGGCGCATCACCGTGTTGGTCGCCACCGACGTGGCCGGG CGTGGGATCCATATCGATGGCATCAGCCACGTGATCAACTTCACCCTGCCGGAAGACCCTGACGACTACGTGCACCGCATTGGCCGTACCGGCCGTGCCG GCACCAGTGGTGTATCGATCAGCTTTGCCGGTGAGGATGACTCGTATCAGCTGCCGGCGATCGAAGCGCTGCTGGGGCGCAAGATCAAGTGCGAGATGCC GCCGGATGAACTGCTCAAGCCGGTGCCGCGCAAGCATCACTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCTTCAGCGGGCTACACGCGCCCTGTGGGAGCGGCCTTGTGCGGCCCAATCGCCACACAAGCCCCCCTGTAGGAGCGGGTTTACCCGCGAATACGGTAGT GGCGGCAACGGTGAACGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGCGACCGGTGGCGCCTTGATTACCAG CGCCCCGCCGCATCCTGGTCACTCTGCCGCCCCTCCACCCACCTTGGCCCTTCCTGAGTATTCTCCTTCTTCCAGAACGGCGCCCGGGTCTTCAGGTAGT CCATGATGAAGTTGCAGGCATCGAACGCCGCCTGCCGATGGGCACTGGCCACCCCCACGAACACAATCGGTTCGCCCGGTTCCAGCGCACCGATGCGGTG CAGCACCTCCACCTTCAATAGCGGCCAACGCTGCTCGGCCTCGACCACGATCTTGGCCAGGGCCTTTTCGGTCATGCCCGGATAGTGTTCGAGGAACATC
Amino Acid Sequence
>ATP-dependent RNA helicase RhlB
MLKALRKIFGKGEAAPQAAAPAASVTPEARPAAKPAAPHANPAPKAEQPAAATPPADQPAKDKPRRERKPKPQASLWKPEDFVVEPQEGKTRFHDFKLSN ELMHAIHDLGFPYCTPIQAQVLGYTLRGQDAIGRAQTGTGKTAAFLISIISQLQQTPPPKERYMGEPRALIIAPTRELVVQIAKDAAALTKYTGLNVMSF VGGMDFDKQLKALEARHCDILVATPGRLLDFNQRGEVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPPKSERQTLLFSATFTDDVMNLAKQWTTNPA IVEIEPENVASETVEQHVYAVAGSDKYKLLYNLVTQNKWERVMVFANRKDEVRRIEEKLVRDGINAAQLSGDVPQHKRIRTLESFREGRITVLVATDVAG RGIHIDGISHVINFTLPEDPDDYVHRIGRTGRAGTSGVSISFAGEDDSYQLPAIEALLGRKIKCEMPPDELLKPVPRKHH
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site