Pseudomonas putida H, AC138_RS08265

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida strain H contig_17, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTGGATATGCGTTATTACAACGTGATCTACGACATCATCGAAGACGTCAAGAAGGCCCTGACCGGCATGCTCGGCAGCGATGTTCGCGAGAACATCCTGG GTGTCGCCGAAGTACGTGACGTGTTCCGTTCGCCGAAGTTCGGCGCCATCGCTGGCTGTATGGTCATCGAGGGTACCGTGTACCGCAACCGTCCGATTCG CGTACTGCGTGATGACGTTGTGATCTTCGAAGGCGAGCTGGAATCGCTGCGTCGCTTCAAGGACGATGCTTCCGAAGTCCGTTCGGGCATGGAGTGCGGT ATTGGCGTCAAGAGCTACAACGACGTCAAGGTCGGCGACAAGATCGAAGTCTTCGAGAAAGTCCAGGTGGCTCGTACCCTTTAAGGGCGAGCGAGCCGCA AGCGCCTGCTACAGGGCGGCTTGCGGTACCTCTTCAGGTAGCGCCCGGTCAGGCATTCGTCTGTCCGGGCGTTTGCCGCTTTAAGTTACAGGTAGCAAGA
DNA Sequence for Gene
>AC138_RS08265
ATGGCCAAAGAATATAGCCGTACCCAACGTATTGGCGATCAGATGCAGCGCGAGCTGGCCGAGCTGATCCGTCGCGAAGTCAAGGATCCGCGTGTCGGTC TGGTGACTATCACCGCCGTGGACGTGAGCCGTGACCTGGGCCATGCCAAGGTGTTCATCACCGTCATGGGCGAGGAAACCCCGGATGCCGTGCAGCAGTC GCTCAAGGCATTGAATAGCGCCGCCAGCTTCCTGCGTCTGCACCTGGGGCGTTCGATGCAACTGCGCAGCGTGCCGCAGCTGCACTTCCATTTCGATGAA AGTGTCAGCCGTGGTGTGCACCTGTCGGCGCTGATCGAGCGTGCAGTGGCCGAAGACCGCCTGCACAAGGATGCCGACGAGTCGGACACCAAGGAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCGGTGGCCCAGGTCAAACGTATCCGCCGCAATGTCAGCGGCATCATCCTGCTCGACAAGCCGCTGGGCTTCACGTCCAATGCCGCCTTGCAGAAAGTGC GTTGGCTGCTGAATGCGGAAAAGGCCGGCCATACCGGTAGCCTCGACCCGCTGGCGACCGGCGTGTTGCCGCTGTGCTTCGGTGAAGCGACCAAGTTTTC GCAGTACTTGCTGGATTCCGACAAGGGCTACGAAACCGTCATGCAGATGGGGCAGACTACCAACACCGGCGATGCCGAGGGTGAGGTGCTGCAGACCCGC GACGTGACCGTTGGTCGCGCCGACATCGAAGCAGTGCTGCCACGTTTTCGCGGCCCGATCAGCCAGATACCGCCTATGTACTCGGCGCTCAAGCGTGACG GCCAGCCGTTGTACAAGCTGGCACGTGCAGGAGAGGTAGTGGAGCGCGAGGCGCGTTCTGTTACTATTAACCGCTTGGAGTTGCTCGAGTGCGAAGGCAC
Amino Acid Sequence
>ribosome-binding factor A
MAKEYSRTQRIGDQMQRELAELIRREVKDPRVGLVTITAVDVSRDLGHAKVFITVMGEETPDAVQQSLKALNSAASFLRLHLGRSMQLRSVPQLHFHFDE SVSRGVHLSALIERAVAEDRLHKDADESDTKE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site