Pseudomonas putida H, AC138_RS07150

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida strain H contig_15, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GACGGCGTTCCAGATCGGTTTCATGATCTTCATCCCGTTCCTGATCATCGACATGGTCGTGGCCAGTGTGCTGATGGCCATGGGTATGATGATGCTGTCG CCGCTGATCATCTCGCTGCCGTTCAAGATCATGCTGTTCGTGCTGGTCGACGGCTGGGCGCTGATCATGGGCACCCTGGCCAGCAGTTTCGGCGGCGTCT GACGCCGTCAAGGAGAGCCGCCGATGACACCTGAAGTCGCTGTCGACCTGTTCCGTGATGCCCTGTGGCTGACCACCCTCATGGTCGCCGTGCTGGTGGT GCCGAGCCTGTTGGTGGGCCTGGTGGTGGCGATGTTCCAGGCGGCCACGCAGATCAACGAACAGACCCTGAGCTTTTTGCCGCGCCTGCTGGTGATGCTG ATCACGCTGATCATCGCCGGGCCGTGGCTGGTGCAGAAGTTCATGGAGTACATCACCACGCTCTACACCAACATCCCGCAGCTCATAGGTTGATGCGGCG
DNA Sequence for Gene
>AC138_RS07150
ATGCTGGAGCTGACCGACACGCAGATCGGCACCTGGGTCGCCACCTTCATCCTGCCGTTGTTCAGGGTGACCGCGGTGCTGATGACCATGCCGATTTTCG GTACCCGCATGTTGCCAGCGCGGATTCGCCTGTACGTAGCGGTGGCGGTGACCGTTGTGATCGTGCCGGCATTGCCGCCGCTGCCCGAGTTCGACCCGTT GAGCCTGCGCGGTATGCTGCTGTGCGCCGAGCAGATCATCGTCGGTGCGCTGTTTGGCCTGGCCTTGCAGTTGCTGTTTCAGGCTTTCGTGGTTGCCGGG CAAATCGTCGCGGTACAGATGGGTATGGCGTTCGCCTCGATGGTCGACCCCGCCAACGGGGTCAACGTCACGGTAATCAGCCAGTTCATGACCATGCTGG TGAGTGTGTTGTTCCTGTTGATGAACGGCCACCTGGTGGTGTTCGAGGTACTGACCGAAAGTTTTACCACCTTGCCGGTGGGGAGTGCGCTGGTGGTCAA CCACTTCTGGGAGCTGGCCGGGCGCATGGGCTGGGTGTTCGGTGCCGGCCTGCTGTTGATTCTGCCGGTGATCGCTGCGCTGCTGGTGGTGAACATTGCC TTTGGCGTAATGACCCGCGCCGCGCCGCAGCTGAACATTTTCTCCATCGGCTTCCCGCTGACCTTGGTCATGGGCATGTTCATCTTCTGGGTCGGCCTGG CCGATGTCTTGTCCCACTATCAGGCATTGGCCAGCGAAACGCTGCAATGGCTGCGTGAGCTGGCGAGGGTACGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCATGGCAGAAAGCGAGAGCGGTCAGGACAAGACAGAAGACCCCACCGAAAAGCGCAAGCGCGACGCCCGCGAGAAGGGCGAGGTCGCCCGCTCCAAGGA GCTGAACACGGTGGCGGTGACCCTGGCGGGTGCCGGTGGCCTCCTGGCGTTCGGCGGCCACGTGGCCGAGACATTGCTTGCGTTGATGCGCATGAACTTC AGTTTGACCCGCGACATCATCGTCGATGAACGGGCCATGGGTGCCTTCCTGCTGGCCTCGGGCAAGATGGCCATATGGGCGGTGCAGCCGGTGCTGATCC TGCTGTTCGTGGTTTCCTTCGTGGCGCCCATCGCGCTTAGCGGCTTCCTGTTCTCGGGCAGCTTGCTGCAGCCAAAATTCAGCCGCATGAACCCGCTGTC GGGGATCAAGCGCATGTTCTCGATGCAGGCCCTGACTGAATTGCTCAAGGCGCTGGCCAAGTTCTTCGTGATTCTGGTGGTGGCGGTGGTGGTGCTCTCC
Amino Acid Sequence
>flagellar biosynthesis protein FliR
MLELTDTQIGTWVATFILPLFRVTAVLMTMPIFGTRMLPARIRLYVAVAVTVVIVPALPPLPEFDPLSLRGMLLCAEQIIVGALFGLALQLLFQAFVVAG QIVAVQMGMAFASMVDPANGVNVTVISQFMTMLVSVLFLLMNGHLVVFEVLTESFTTLPVGSALVVNHFWELAGRMGWVFGAGLLLILPVIAALLVVNIA FGVMTRAAPQLNIFSIGFPLTLVMGMFIFWVGLADVLSHYQALASETLQWLRELARVR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site