Pseudomonas putida H, AC138_RS06970

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida strain H contig_15, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ATAAATACGGGCTTTCCAGTGGTTGGCACAGCCCTTGCTATGCCTTGCTCAACGAAATTCCGGTCAACCTCTGAAGGTTTCCCTGACATGAGCATCAGCT TCGACAAGGCGCTTGGTATTCACGAAAAAGCACTGGGCTTCCGCGCCCAGCGCGCTGAAGTGCTGGCCAACAACATCGCCAACGCCGACACGCCCAACTA CAAGGCCCGTGACATGGACTTCGCCTCGGTGCTCGCAGCCGAAAGCGACAAGCAGCAGAGCGGCGGCCGCTTCAACCTTGACCGGACCAACAGCCGGCAC ATCGAAGCTGAGGGCCTGGCCATGGCCGATGAAACCCTCAAGTACCGCACGCCGCTGCAGCCGTCGATCGACCAGAACACCGTGGATGCGCAGATCGAAC AATCGAACTACACGGAAAACGCGATTGGCTTCCAGGCCAGCTTCACCTTGCTCAACAGTAAATTCAAAGGGCTGGTTTCCGCCCTGCGGGGAGAATGACC
DNA Sequence for Gene
>AC138_RS06970
ATGTCCCTTTCCAGTGTCTTCAACATTGCCGGTAGCGGCATGAGCGCACAGAACACGCGTCTGAACACCGTGGCGTCCAACATCGCCAACGCCGAGACCG TGTCTTCGAGCATCGACCAGACGTACCGCGCCCGCCACCCGGTGTTCGCCACCACCTTCCAGAATGCGCAGGCCGGTAGCAGCCAGTCGCTGTTCGAAGA CCAGGGCGAGGCAGGGCAGGGCGTGCAGGTAAAAGGCATCGTCGAAGACCAGAGCACCCTTGAAGCACGCTACGAGCCGAACCACCCGGCGGCGAACAAG GACGGCTACGTCTACTACCCGAACGTCAATGTGGTCGAGGAGATGGCTGACATGATCTCCGCCAGCCGCGCGTTTCAGACCAACGCTGAACTGATGAACA CGGCCAAGAACATGATGCAGAAAGTGCTGACCCTGGGGCAGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TAGGAAGCCGACATGACCACCACCAATTCCACTACAGACGTCGGCAGCGCATACCTGACCTCGCTGCAGAAGCAGACGTCCAAGACTGACAGCTCTACCG GCGCCGCCGGCAGCGCGCTGGGCAAGGACGCGTTCCTGCAGTTGCTGGTCACCCAGATGCAGAACCAGAACCCGCTCGACCCGCAGGAAAACGGCGAGTT CGTGGCCCAGTTGGCGCAGTTCAGCAGCCTGGAAAGCATGCAGTCGCTGAACGACGCTGTGACCTACATCGCGGCCGGGCTGCAATCTTCCCAGGCCTTG CAGGCCTCCTCGCTGGTCGGGCGCAATGTCATTGTCCAGACCGACAAGGCTGTGGTCGATACCAGCAAGGACATGAAGGGCTCGGTCAACCTGACGTCGT CCAGTACCTCCACCTCGGTGGGGATCTACGACAAGGACGACAAGCTGGTGCGCACCATCGAACTCGGTACCCAGAAGTCTGGCAGCATCGACTTTACCTG
Amino Acid Sequence
>flagellar basal body rod protein FlgC
MSLSSVFNIAGSGMSAQNTRLNTVASNIANAETVSSSIDQTYRARHPVFATTFQNAQAGSSQSLFEDQGEAGQGVQVKGIVEDQSTLEARYEPNHPAANK DGYVYYPNVNVVEEMADMISASRAFQTNAELMNTAKNMMQKVLTLGQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site