Pseudomonas putida H, AC138_RS05745 (fadH)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida strain H contig_13, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCGACCGCCACCACCGTTGATGACCGACCAGCAGTCGAACACCCCGTGGCAGGCGTAGCCTTCATCCGAGGTGTAGGAAAATTCGTGGTCGAGGCTGTTC CAGCTGGCTGCCAGGTCACTGTTCACGCTGTCCTGGCGAACGATGCTGATGGTGTCCCATCCTTTTGTCAGCATGAGCGAACCCTCCGGGCGCACTGAGT AGGCGCCACGTTCCATGGGTGGATGATCAAACGTGCTTGAAGAGTCTGGCAGAGCCGCGTTGTCTGGCAAATGCGCGGGGAGACTGTTTGGCGATCAAGC CAGGCGAACCTTATAGCGCTGAAGTTCTGGAGCCTTCCCGACAGTCGCTGCCTCTGCTGTTCATCACGATCATTAACTTGTCAGTTTTGATCATTGAGGC AATTCAAACGGCTGTTTAATGTCGCAGGCAGACAAACGACGGGGCCCGCCACCCAGTGAGGTGCCCGCATTCCGTGATCACGCCATCAGGGGACCTTTCC
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| DNA Sequence for Gene |
>AC138_RS05745
|fadH
ATGGCCGCCGACCGCTACCCGCACCTGCTTGCTCCGCTGGACCTGGGCTTTACCACCTTGCGCAACCGCACCCTGATGGGCTCGATGCACACCGGCCTCG AAGAGCGCCCCGGCGGCTTCGAGCGCATGGCAGCTTACTTTGCCGAGCGCGCCCGGGGCGGCGTTGGCCTGATGGTCACGGGCGGCATTGCGCCCAATGA TGAAGGCGGGGTGTATTCCGGTGCGGCAAAGCTCAGCACCGAGGAAGAGGCCGACAAGCACCGCATCGTCACCGAGGCGGTGCACGCTGCCGGTGGCAAG ATCTGCCTGCAGATACTGCATGCCGGGCGCTACGCCTACAGCCCACGGCAGGTGGCACCTAGCGCGATCCAGGCGCCGATCAACCCGTTCAAGCCCAAAG AGCTGGATGAGGCGGGCATCGAGAAGCAGATCGCCGACTTCGTCAATTGTGCCGTGCTGGCTCAGCGTGCCGGTTACGACGGCGTCGAAATCATGGGTTC GGAAGGCTACTTCATCAACCAGTTCCTGGCCGCCCACACCAACCACCGCACCGACCGCTGGGGCGGCAGTTATGAAAACCGCATGCGCCTGGCAGTGGAA ATCGTCAGCCGGGTGCGTGGCGCGGTAGGGCCGAACTTCATCATCATCTTCCGCCTGTCGATGCTCGACCTGGTCGAGGGTGGCAGCACCTGGGACGAGA TCGAGCTGCTGGCCAAGGCCATCGAGCAGGCCGGCGCGACCTTGATCAACACCGGAATCGGTTGGCACGAGGCGCGTATTCCGACCATCGCCACCAAAGT GCCGCGTGCGGCCTTCAGCAAAGTCACCGCCAAGTTGCGCGGCGTGGTGAGCATTCCGCTGATCACCACCAACCGCATCAACACCCCGGAAGTGGCCGAG GCAGTGCTGGCCGAGGGCGATGCGGACATGGTCTCGATGGCGCGACCGTTTCTCGCCGACCCGGACTTCGTCAACAAGGCCGCTGCCGGTCGTGCGGATG AAATCAACACCTGCATCGGCTGCAACCAGGCCTGCCTGGACCATACCTTCGGCGGCAAGCTGACCAGTTGCCTGGTCAACCCGCGGGCCTGCCACGAGAC CGAACTCAACTACTTGCCTGTACGTACGGTGAAACGCATTGCCGTGGTCGGCGCCGGCCCGGCTGGCCTGGCGGCGGCCACCGTGGCGGCCGAGCGGGGC CACGCGGTGACCCTGTTTGACGCCGCCAGCGAAATCGGTGGCCAGTTCAACGTGGCCAAGCGGGTGCCGGGCAAGGAAGAATTCTTCGAAACGCTGCGTT ACTTCCGCAACAAGGTCAAAAGCACGGGCGTCGACCTGCGCCTGAATACCCGCGTGGATGTGCAGGCACTGGTGGGCGGCGGCTTTGATGAAGTCATCCT GGCTACCGGCATCGCCCCGCGTACCCCGGACATCGCGGGCGTGGAGCATGCCAAGGTGCTCAGCTACCTGGACGTGCTGCTCGAGCGCAAGCCGGTGGGC AAGTCGGTGGCCGTGATTGGCGCGGGAGGTATCGGCTTCGATGTGTCCGAGTACCTGGTGCATCAGGGCGTGGCCACCAGTCAGGACCGAGCGGCATTCT GGAAAGAGTGGGGCATCGATACCCATCTTCAGGCGCGAGGTGGTGTGGCCGGGATCAAGGCCGAGCCGCATGCTCCGGCGCGGCAGGTGTACCTGTTGCA GCGCAAGAAATCCAAGGTGGGCGACGGGCTCGGCAAGACGACCGGCTGGATTCACCGCACCGGGTTGAAGAACAAGGGGGTGCAGATGCTCAACAGTGTC GAGTATCTGGGTATCGACGATGCCGGCCTGCACATTCGTGTGGACGGCGGCGAGCCCCAGGTGCTGGCGGTGGATAACGTGGTGATCTGTGCCGGGCAAG ATCCGCTGCGCGAGCTGCAGGAAGGGCTGGTGGCGGCGGGGCAGTCGGTGCACCTGATCGGCGGCGCGGATGTGGCGGCCGAGCTGGATGCCAAGCGGGC GATCAACCAAGGCTCGCGGTTGGCGGCTGAGCTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGTTGTCGGGGCTGCGTGAGCCCGACACCTGCACGCGTGGGAGCGGGCATGCCCGCGAAACAGGTGACGCGGTGGATGGCACCGGCATTGCCGGTGTTCG CGGGTGAACCCGCTCCTACGACGGGCTGTGCCGGGGCATCGATGCCTGTGTCGAGCCACCCTGGCACTGTGATGCCTCGGCGGGGGCGGGTCATCGATTA CAAGCGCTTGCGGGATTACCCTGTAAACTGCGATCCATGCATGTATTCGACCTCCCCCAAGCCCCGCTGCATTTTCTGGACTTGCCCTGGCTGGAACAAG CCCAGGTCCAGGCCGCCACTCTGCGCCTGGACCTGATCGACCCGCTGATCAGCGGCAACAAGTGGTTCAAACTACGCCACCACCTGCAACAGGCCGGCGC CAGCAACGCTCCAGGCCTGATCAGCCTCGGCGGTAACCATTCCAACCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGC
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| Amino Acid Sequence |
>2,4-dienoyl-CoA reductase
MAADRYPHLLAPLDLGFTTLRNRTLMGSMHTGLEERPGGFERMAAYFAERARGGVGLMVTGGIAPNDEGGVYSGAAKLSTEEEADKHRIVTEAVHAAGGK ICLQILHAGRYAYSPRQVAPSAIQAPINPFKPKELDEAGIEKQIADFVNCAVLAQRAGYDGVEIMGSEGYFINQFLAAHTNHRTDRWGGSYENRMRLAVE IVSRVRGAVGPNFIIIFRLSMLDLVEGGSTWDEIELLAKAIEQAGATLINTGIGWHEARIPTIATKVPRAAFSKVTAKLRGVVSIPLITTNRINTPEVAE AVLAEGDADMVSMARPFLADPDFVNKAAAGRADEINTCIGCNQACLDHTFGGKLTSCLVNPRACHETELNYLPVRTVKRIAVVGAGPAGLAAATVAAERG HAVTLFDAASEIGGQFNVAKRVPGKEEFFETLRYFRNKVKSTGVDLRLNTRVDVQALVGGGFDEVILATGIAPRTPDIAGVEHAKVLSYLDVLLERKPVG KSVAVIGAGGIGFDVSEYLVHQGVATSQDRAAFWKEWGIDTHLQARGGVAGIKAEPHAPARQVYLLQRKKSKVGDGLGKTTGWIHRTGLKNKGVQMLNSV EYLGIDDAGLHIRVDGGEPQVLAVDNVVICAGQDPLRELQEGLVAAGQSVHLIGGADVAAELDAKRAINQGSRLAAEL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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