Pseudomonas putida H, AC138_RS04890
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida strain H contig_11, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGTCGTTGCTTTACCCACGGGTTTACCTACAGCGGCCACCCGGTGTGCTGCACGGCGGCGCTGAAGAACATCGAGATCATCGAGCGTGAGCAACTGCTCG ATCATGTCAACGACGTGGGGAGTTACCTTGAGCAACGCTTGCAGAGCCTGCGCGATCTGCCGCTGGTGGGGGATGTGCGCTGCATGAAGCTGATGGCCTG TGTCGAGTTCGTCGCCAACAAGGCCAGCAAGGCACTGTTCGCCGATGAGGTGAACATTGGCGAGCGCATCCACAGCAAGGCGCAGGAAAAAGGGTTGCTG GTGCGCCCGATCATGCACCTGAACGTGATGTCGCCACCGTTGATCATCACCCATGCGCAGGTGGACGAGATCGTCGAGACCCTGCGCCAGTGCATCATTG AGACCGCGCGTGAACTCACGGCGCTTGGCCTGTACCAAGGCCGATGAACCTGGCGCAAAGGGCTGTGCGCGGGCGTGCCTGGCAGGCTAGACTGCCGGGC
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| DNA Sequence for Gene |
>AC138_RS04890
ATGACCCAGGCCTCTCCCGATACCCCGCTTACCCTCACAATGGGCGCGCTGCAGCAGTGGCACGTGGCGTTGCAGCGCGCCCTGGCCCATGGTGAAACCC CCGAGGCGCTGGAGTATGTGGCCGCTGCCATCGGCCAGTTGGTGCAGGTGGAGTCGATGATGATCAGCCTTGAGTGCCAGGGGCGGGCGCCGCAGTTGCT GTACCAGCAAGGCATCCCCGAACGGCATCGGGCCGCGGTGCTGGAGCGCTATTTCAGCGCCGGCTACCTGCTGGACCCTTTCTGCCTTGCCGTGCAAAGC GGCCTGGCCGAAGGCTTCTACCACCTGCAGGAAATCGCCCCCGACAACTTCTTCGACAGCGACTACTACAAGGCCTATTACCTGGGTACAGGTTGCAGTG AAGACAGCTACTACATCGTCGACATCAGCGCAGGCCGCAAGCTGTCGCTGAGCCTGTTCCAGGGCTGCAGCGGCACGCGCCTGAACGCCGGGCAGGTCGA CCTGTTGCGTGCGCTGGAGCCGATGGTGCGCGAACTGCTGGGGCGTTATGCCCGACACAACCTGGAACCGGGCGCTGCATCAACCGAGCGCGGCAGCCTG CAGGCAGCGTTCGACAGCTTCGGCTGCCAGGTGCTGACCGACCGCGAACGGGAAGTGGCGCACATGATCCTGCGCGGGCACTCGGTGAAATCTACCGCGC TGGAGTTGGGTATTTCGCCGGAGACCGTGCGCATGCACCGCAAGAACCTGTACATGAAGCTTGAGATCAACTCGCAATCGGAGTTGTTTGCACGGTTTAT CGACTGGTTACGCGGTGATCATTTGCCGATGATTTTAGATTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CTGTCTTGAGCCCTGGCGATTCGCGTGTCGCAGCATGAAACAGCTCAATGGGAACATCCCTATACCGATGGGTATACGGGGCCGGCATAGCCAATAGGGC AGGGCTATACAGCCCCTGTGGGCATGGTGTGTTCATATGGCCTGTTGCTCGATCAACGCCAGGCACCGCTGCACGATCGGGCTCACATCACCCTTGCGCC GGCTGAGGATGATCGGGCTGACGGCGCCGCTATCAAGCAGGCCGACATACTCGATGTCGGGACGGTGCTGCTGCTGTACCGATGCCGGTACCAGGGTCAC ACCGACGCCAACCGCTACCAGGCCGATGGCGGTCTGCAGTTCGTTGGCCCACTGGCTGACACGAATGCTCATGCCGTGGTGGGCGAACAGCGCCAGCACG TGGTCGGCATAGCTGGGCCGGGGATTGGCCGGGTAGAGGATGAACGCTTCGCCAGCCAACTGGGCCAGACTGAGCGGGCTGCCCGCCAGGGGGTGGCCCT
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| Amino Acid Sequence |
>LuxR family transcriptional regulator
MTQASPDTPLTLTMGALQQWHVALQRALAHGETPEALEYVAAAIGQLVQVESMMISLECQGRAPQLLYQQGIPERHRAAVLERYFSAGYLLDPFCLAVQS GLAEGFYHLQEIAPDNFFDSDYYKAYYLGTGCSEDSYYIVDISAGRKLSLSLFQGCSGTRLNAGQVDLLRALEPMVRELLGRYARHNLEPGAASTERGSL QAAFDSFGCQVLTDREREVAHMILRGHSVKSTALELGISPETVRMHRKNLYMKLEINSQSELFARFIDWLRGDHLPMILD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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