Pseudomonas putida H, AC138_RS02750

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida strain H contig_10, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AGTGCTGACCACCTTGGCTGCCGGCTTGGCCGCCGCCACTGCAACAGCCGGCTCTGCTGCCACCTTGGCGGTCTTGCGCAGTTCAGCCAGCGATGGGGCC TTGCTTTTTGCGGCAGCGGCCGCCTCGGGTTTGCCCAGCGAACGCTGGCAAGACTTGCAGGATACGTCCTCGGTCACGGCAGTGCTGACAAGGGTCTGAC TGCTGCGCCCGCAGGCGGAATCGAGGCCATTGGAGGAAAAGTGAGTAACCAAAACCGAACATCTCCGATGCGTTGTCATGTGAAGCGGGCGCTATTCTCG CACAGGTTACAGGGGCTTGCCGAACCACCGGGCAGCCACCATCGGTCAACATGGCTGGCACTTCGCCATAATCCGAGGCATGCTAGCCGGTTTCGGGTGT CCGGCCTTATAGTGCGCCACCGCGGTGCGCAAGCCGGGCGCCGGCACCCACCGTGCACGATCATTCCCTGCCATCGCCAGCCCAATCGCAGGATCAACGC
DNA Sequence for Gene
>AC138_RS02750
TTGACCAACCTTACTCATCCGTCGTCATTGCGTTCCGCCCCACAAGCACCCGCGACTCTCCTGCGCGGGTCGATCAAGGGTGCGCTGGCGCTGCTGGCCC TGATCCTGCTGGGCCTGCTGCTGTGGCAGCTGTTCGCCCAGTTCAATCATACCCAGGCCGAATTGCGCAAACAGAGCCTGGACGCCTCCGCGGAACTGGC CGACCACCTGAGCCTGAACATGGCGCTCAAGGCGCAACAGGCCGTGAACGTGGTGCAACCCTACCCTGATGCACCGACACCTGCCGCCCTGCCCAGCCTG CTCGGTACCCTGCGCGAACGCCTTCCCGCCCTGCAGAGCGTGGCCTGGCTGGACAACGTCGGGCAGCTACGCGCCGACAGCCTGGCCGGCAGCCCCGACC GCCAGTCACTTGACGAGTTGCTCGTGCTGAGCCAGGGACGCCCGTACTTCTTCACCAATTCGGCCGACAACCACCTCCTGTACCTGTTGCTGCGCCAGGA TGCCGCACAGGGTAGCGGCTACTGGCTGCTGCGCCTGTCACCGGACTATTACCGCGAGCTCACCCTCCACCTCGAGGGCAGTGGCCACCCGCAGTGGCTG CTGGAAAACAGCCGCAGCGGCGAGGTGCTGCAGCGCCATGCCGCAGCCGACACCAGCGACGAGCCGCTGCAAAGCGTGATGCTGGCCTTTATCGAAAACA GCACCTGGCAGCTACGCGGTCTGTTCGACGCCAAACTGGCCCAGCAAAAATTATTGCCGGCGCTGCTCGGCAAGTGCCTGCTGGTGCTGTTCTGCGCCCT GCTGCCAGTGCTGGCGCTGATCAACATGCGTCGCCGCCAACGGGCTCTGCAGGAAGACCGCCGGCGTTATCAGGAAATTTTTGAAGGCACCGGCGTTGCC CTGTGCGTGCTCGACCTGTCCAGCCTGCCCGGCCAGCTCGACCGCTACCACCTGCGTAACCGGGCCGCGCTCAAGCACAGCCTGGCGCTGGACCCGAACC TGCGCCGCTCGCTGCTGCTGGAGCTGAAGATCACCGAGGTCAACCAAGTGGCGCGCCAGCTGCTGAACATCGACTGCCACGAAGGTGCCTGGCAGCGGCT GATCGATGGCACTGGCGACAGCCGAGACAGCGTCGGCATGCAACTGATCGACGCACTGATCGAACAACGCCCGTTGCTGGAGCTGGAAGTGCGCCTGCCG ACACCGCAGGGCACCGAGCTGCACCTGTGGCTGATGGCGCGCCTGCCGCTGCAGCGCCGTGATTATCAGGCGGTGATCCTCAGCATCAGCGATATCACCA GCCGCAAACAGGTGGAGCTGTCGCTACTGGAACGCGAAAGTTTCTGGTCGGACGTGGTACGCACCGTACCCGACCAGTTGTATGTGCAGGATGTGCCGAG CCAGCGGATGATCTTCAGCAACCGCCACCTCGGCCAGACCCTGGGCTACGACCGCACCGAGCTGGCACAGATGGGCGACCGCTTCTGGGAGCTGCTGCTG CACCCCGAGGACGCCGCACACTACCAGGCACTGCGCCGCCAACAGCGCGACAACTGTCATGACCAACCGCTGCACTGCCAGCTGCGCTTCCGCCACCGCG ACGGAAGCTGGCGCTGCTACGACATCCGCGAGCAGGTGCTGACCCGCAACGCCGAAGGCCTGGTGACGCGCATCATCGGTGTGGGCAAGGATGTGACCGT TCAGATCGAGGCCAGCCAGTCGCTACGTGACAGCGAGCAACGCTACCGCATGCTCGCCGAAAGCATCAGCGACGTGATCTTTTCCACCGACAACCAGCTC AAGCTCAACTATGTCAGCCCCTCGGTACAGAGCGTGCTGGGCTACCAGGCCGACTGGATCTTCGCCAACGGCTGGCAGTCGATCGTCGCCAACCCGGCCC AGCTCACTGGCATCTACAGCCTGATGGAGCGTGTCAGCAAGGCCATGGGCGATCCGGCGCAGATGGCGCAACTGTGCAGCCAGTTACCCACCCAACTGTT CCTGTTCGACTGCCTGCGTGCCGATGGCCGCAAGATCCCGATCGAGCTGCGCCTGGTGCTGGTGTGGGACGATGACCAGCGCTTCGAAGGCGTACTCGGG GTGGGCCGCGACATCAGCCAGCAACGTCGTGCCGAAAAAGACCTGCGCATGGCCGCGACCGTATTCGAACATTCCACGTCGGCGATCCTCATCACCGACC CGGCCGGCTATATCGTTCAGGCCAACGAGGCGTTCAGCCGCGTCAGCGGTTACGCCGTCAGTGAAGTGCTCGACCAACTGCCGGGCATGCTCACTGTCGA CGAACAGCAGGAAGGCCACCTGCGCTATGTGGTCAAGCAACTGCACCAGCGCGGCAGCTGGGAAGGTGAGGTGTGGCTCAAGCGCCGTGACGGCGACCAC TACCCGGCCTGGGTCGGCATCACCGCGGTACTGGACGACGAAGGCGACCTGGCCAGCTACGTGTGCTTCTTCACCGACATCAGCGAACGCAAGGCCAGCG AACAGCGCATCCACCGCCTGGCCTACTACGACGCCCTTACCCACCTGCCCAACCGCACACTGTTCCAGGACCGTTTGTACAACGCCCTGCAGCAGGCCGA GCGGCAGAAGGCCTGGGTGGTGCTGATGTTCCTCGACCTCGACCGCTTCAAACCGATCAACGACTCCCTCGGCCATGCGGCCGGCGACCGCATGCTCAAG GACATGGCCCTGCGCCTGCTGGCCTGCGTGGATGACGACGACACGGTGGCACGCATGGGCGGCGACGAGTTCACCCTGTTGCTGCAACCGCGCCCCACCC GTGAAATGGCCCTGAACCGCGCCATCCACGTGGCCGAGAACATCCTCGGCAGCCTGGTGCGGCCGTTCGTGCTGGAAAACCGCGAGTTCTTCGTTACCGC CAGCATCGGCATCGCCCTCAGCCCGCAGGATGGCAGTGAGCTGAGCCAGCTGATGAAGAACGCCGACACCGCCATGTACCACGCCAAGGAGCGCGGCAAG AACAACTTCCAGTTCTACCAGGCCGAAATGAACGCCAGCGCCCTGGAGCGCCTGGAGCTGGAAAGCGACCTGCGCCATGCCATGGAGCAGAACGAATTCA TCCTCTATTACCAGCCGCAGTTCAGCGGCGACGGCAAGCGCCTGACCGGCGCCGAAGCGCTGCTGCGCTGGCGTCACCCGACCCGAGGCCTGGTGCCGCC GGGCGACTTCATCCCGGTGATCGAGGAACTGGGCCTGGTGGTGGACGTGGGCGACTGGGTGCTGCGCGAGGCCAGCCGCCAGCTCAAGGCCTGGCACAAG GCCAAGGTGCGGGTGCCGAAAGTGTCGGTGAATATTTCGGCGCGGCAGTTCTCCGACGGCCAGCTAGGCACGCGGATTGCCAACATCCTGGAAGAAAGCG GCCTGCCGCCGGCATGCCTGGAACTGGAGTTGACTGAAAGCATCCTGATGCGCGAGGTGAACGAGGCGCTGCAGATTCTTGCCAGCCTGAAGAACCTCGG CCTGAGCATTGCGGTAGACGACTTCGGCACCGGCTACTCGTCGCTCAACTACCTCAAGCAGTTCCCCATCGACGTCCTGAAGATCGACCGGACCTTCGTC GACGGCCTGCCCGAAGGCGAGCAGGACGCGCAGATTGCCCGGGCGATCATCGCCATGGCCCACAGCCTCAACCTGGCAGTCATCGCCGAGGGCGTGGAAA CCCACGAACAGCTGGAGTTCCTGCGCGAGCATGGTTGCGACGAGGTGCAGGGCTATCTGTTCGGGCGGCCGATGCCAGCGCATCAGTTCGAGGCGCAATT CTCCAACGAGACCTTGTTCATGTTCCATTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCCGCACACAAGGCCCCCGTAGGCGCGGGTTTACCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGCGCCGCATTCCTGCATAAAAAAGCGGACTTCC AGGTCAACTCCCGCCCCCGCCCAGCCCAGAAACGGCGCGGGATGCAAGATGAAGCCCATTGGTCTGCGACTTGACGCCACTTCATATGCCAGCCGCGAAT CAATCGGTTAGAATGCACACCCAAATTACCCCGATCCTTGAGGACCGCCATGTTCAGCCGTGATTTGACCATTGCCAAGTACGACGCCGAGCTCTTCGAA GCCATGCAGCAAGAAGCTCTGCGCCAGGAAGAGCATATCGAGCTGATCGCTTCGGAAAACTACACCAGCCCGGCAGTCATGGAAGCCCAGGGCTCGGTCC TGACCAACAAGTACGCCGAAGGCTACCCAGGCAAGCGCTACTACGGCGGTTGCGAGTACGTCGACGTCGTCGAGCAACTGGCCATCGACCGTGCCAAGGA
Amino Acid Sequence
>diguanylate phosphodiesterase
MTNLTHPSSLRSAPQAPATLLRGSIKGALALLALILLGLLLWQLFAQFNHTQAELRKQSLDASAELADHLSLNMALKAQQAVNVVQPYPDAPTPAALPSL LGTLRERLPALQSVAWLDNVGQLRADSLAGSPDRQSLDELLVLSQGRPYFFTNSADNHLLYLLLRQDAAQGSGYWLLRLSPDYYRELTLHLEGSGHPQWL LENSRSGEVLQRHAAADTSDEPLQSVMLAFIENSTWQLRGLFDAKLAQQKLLPALLGKCLLVLFCALLPVLALINMRRRQRALQEDRRRYQEIFEGTGVA LCVLDLSSLPGQLDRYHLRNRAALKHSLALDPNLRRSLLLELKITEVNQVARQLLNIDCHEGAWQRLIDGTGDSRDSVGMQLIDALIEQRPLLELEVRLP TPQGTELHLWLMARLPLQRRDYQAVILSISDITSRKQVELSLLERESFWSDVVRTVPDQLYVQDVPSQRMIFSNRHLGQTLGYDRTELAQMGDRFWELLL HPEDAAHYQALRRQQRDNCHDQPLHCQLRFRHRDGSWRCYDIREQVLTRNAEGLVTRIIGVGKDVTVQIEASQSLRDSEQRYRMLAESISDVIFSTDNQL KLNYVSPSVQSVLGYQADWIFANGWQSIVANPAQLTGIYSLMERVSKAMGDPAQMAQLCSQLPTQLFLFDCLRADGRKIPIELRLVLVWDDDQRFEGVLG VGRDISQQRRAEKDLRMAATVFEHSTSAILITDPAGYIVQANEAFSRVSGYAVSEVLDQLPGMLTVDEQQEGHLRYVVKQLHQRGSWEGEVWLKRRDGDH YPAWVGITAVLDDEGDLASYVCFFTDISERKASEQRIHRLAYYDALTHLPNRTLFQDRLYNALQQAERQKAWVVLMFLDLDRFKPINDSLGHAAGDRMLK DMALRLLACVDDDDTVARMGGDEFTLLLQPRPTREMALNRAIHVAENILGSLVRPFVLENREFFVTASIGIALSPQDGSELSQLMKNADTAMYHAKERGK NNFQFYQAEMNASALERLELESDLRHAMEQNEFILYYQPQFSGDGKRLTGAEALLRWRHPTRGLVPPGDFIPVIEELGLVVDVGDWVLREASRQLKAWHK AKVRVPKVSVNISARQFSDGQLGTRIANILEESGLPPACLELELTESILMREVNEALQILASLKNLGLSIAVDDFGTGYSSLNYLKQFPIDVLKIDRTFV DGLPEGEQDAQIARAIIAMAHSLNLAVIAEGVETHEQLEFLREHGCDEVQGYLFGRPMPAHQFEAQFSNETLFMFH
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site