Pseudomonas putida H, AC138_RS00150

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida strain H contig_1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CAAGACCCTGGAACACAGCGGCCAGGTCATCCGCATCACCAGCCCGACCCGCTGGGTGGTGGGCTTCCACGCCTTCGACCTGGCGCGGTTTCGCAATGTC ATCAAAGACCCCAACCGCAGCAGCGCCGAGCTGTACCGCTTCGTGGTGCACTACCTGGTGCTGTTCTACTGCCTGAGCAAGTCGCCTGGCCTTGGGCGGC TGTTCGAGGGCCTGCGCTACGGCCTGAGCTTCGAGCGCCTGAAGGGCTTTGGCGACCTGCCGTTCTGCGTCATCAGCTCGCCGGTGCGCTCGGAACTTCC CGACGACTCGGTCATCCGCAGCAGCACGCAGATTGCCGGCAACACCAGCTTCGAAGAACTGGTAGGCCGCGACAACATCCTGGAAATGAACGGCGAAATC CGTCAGCGCCTGCTGCTGACGATCGAAGGACTGTAACGCGCAGCGCCCGGCACCGGGCCGCGCAATGATTCGCAGCGAATTGCTCGCACTGGAGAACACG
DNA Sequence for Gene
>AC138_RS00150
ATGGCGAAGAAGGAAAGCACTCAGCACAAACTCGACCGCGTTCGCGCGCCTCGGGTCCATATCACCTACGACGTGGACATCGGCGATGCCATCGAGAAAA AGGAGCTGCCCTTCGTCGTCGGCGTACTGGGTGACTTCTCCGGCAACCCGCCGGAGCCGCTGCCCAAGCTCAAGGACCGCAAGTTCGTGTACATCGATCG CGACAACTTCAACGGTGTGCTCAAGGGCATCAAGCCACGCCTGACCTACCGCGTCGACAACACCCTGGCCAAGAACGGTACCCAGTTGGGCGTGGAGCTG AACTTCAACAGCCTCGAAGACTTCGAGCCACAGAACGTGGTCAAGCAGGTCGAGCCGCTGCGCAAGCTGCTGGAAGTGCGCAACAAGCTGGCCGACCTGC GCAACAAGATGGGCGGCAACGACAAGCTCGAAGAGCTGCTGATGGACGTGCTGCAGAACACCGAAAAGCTCAAGACCTTGGGCAAGGAATTCGGCCGTGA AGCCGAAGTGAAAGACCCGTCCAGCGACGATCGCGCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCAGGAGCCCGAACATGACCGACAAGCAAACCGCACCGCAACAGGCCGGCGACCTGGTCGAAGTGGAAAACTTCGCACCACAGCCCTCGCTGCTCGACAG CATCATTTCGCAAAGCCGCGTGGCCCGCTCCGACACCGAGCGCAACCGCACCCGCGACCTGATTGGCGAACTGGTGAACCAGGTGCTCGAGGGTGAGATG ACCCCGAGCAAGGACCTGATCGCCGTGCTCGATTCGCGCATCGCCGAGATCGACGCGATGCTCTCCGAGCAGATGAACGAGATCATGCACGCCCGCGAGT TTCAGCAGTTGGAAGCCTCCTGGCGCGGCCTGAAATACCAGGTAGACCAGACCGAGACCAGCACCACGCTGAAGATCCACCTGCTCAATGCCTCGAAGAA AGACCTGGTACGCGACCTGAAGGCCGCCAGCGAATTTGACCAGAGCGCACTGTTCAAGAAGGTCTACGAAGAAGAGTACGGCACCTTCGGTGGCGCGCCT
Amino Acid Sequence
>type VI secretion protein
MAKKESTQHKLDRVRAPRVHITYDVDIGDAIEKKELPFVVGVLGDFSGNPPEPLPKLKDRKFVYIDRDNFNGVLKGIKPRLTYRVDNTLAKNGTQLGVEL NFNSLEDFEPQNVVKQVEPLRKLLEVRNKLADLRNKMGGNDKLEELLMDVLQNTEKLKTLGKEFGREAEVKDPSSDDRA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site