Pseudomonas putida KG-4, V520_RS22690

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida KG-4 contig00034, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ACACCTTCTGCTCCCTCGTTCACATCGCTGATCAAGGCCAGCGCTCATTGAAGGAGTTGCCGTCGTGAGGAAAACTGACAAACGCCTCTATTACCTGTTG CTGATGGGCTCTGTGCTGGGCTCGTTGAGCCTTACGGCCCAGGCCGACAACGGCATCATCGTGATAACCCGTGACGTGCAGACACGCAACGCCGTTGTCC CGCCGTTACGACCCGACCCCAACCCCACCACCGTCAATGCCAACCCTTCCGCGCACATCCTCAAGCAAACCAACGAACTGAGTGATGGCGACTTCGCCAA CATCAGCAGCGGTGCTGGTATCAGCACCTTGATTACCCAGCAGACCAACAACCTGGGCGGCAACCTCAACAACCAGTCCCAACTGCCCAACCTGGCCGGT GGCCGCGGCACGGGCTCGGGCAATGGCATCTCGAACATGGTCAATTCGAGCGTACAGCGCGGCCTGGCACCGCTGCAGATCCTGACCGGAGGCAAGTGAG
DNA Sequence for Gene
>V520_RS22690
ATGAAGCACACGCTGCTGATCCTGGTCACGCTGTGCAGTACATCGACCTTCGCGCAATCCCCGGTTCCCGTGATCAACAACGCCGACATCGACAGCTCGG GCAGCCGTTACCAGGGCAACCTGTCGGTCAACCAGGCGGCCGGTGACCAACAGCAACAGGCCAACGCGCGCGCCTTCGCGGTCGGGCCCGAGGCCAGCGC CACCACGCAGATTCGCCAGCGCCTGAACACCCCTGCAGCCCCCACAATGAACGCACGCTCGACCATACAGGGCGACGCCTTCAGCAACGGTAGCGGCGCA CTGGGGGTCAACCAGAGCGCCGGCGCCAACACCCAGCAAGCCAACGCACTGAGCATCAGTATCGGTGCCCAGCCGCAAACCATCGACGACAGCGTCCTCA TGCAACAGAACGTGGCGCTGCTCAACAACTCCGGTCCGATTGACACTTCAACTGGCCATCGCCAGGTCACCACCAGTGACCAGGCCTTCACCGGTAGCCG TGGAGTGATTCAGTTGAACCAGAGTGCCGGGGTGGGAAACCGCATGGCCAACACCCTGAGCATCCGGGTCGCGGATTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCCTTCCAGTCAAGAACGACACTTAACCTAATCGTACGGAGAATCACCATGAAACCCTCGATGGCAATCAAGCCTCTGGTTTTCGCAATTGCTGCGGTCA TGGCTGTTGCTGTACAAGCTGATCAGAACGACCGGCGTGGCGGGCACCACAATGGTCACCACAATAATGGGCATCACACCCCTCCTCCCACCAAGATCCC TGTGTATGCCACAGCCAACGCCATGGACAGCCAACGCAGCACGGGTAATACCATCACCAACCAAGGCACCATCAACGAAGCCGAAATGAGCAGCTCGGCC ACGGGCGCAAGTGGCAACGTGGGTGTCAACGTGGCAGCCGGTAACGGCAACCAGCAGGACAATGCTGCGGCCATTGCCAATGCATCGTCCGAGTCCAGCC TGGACAACAGCTTCGTGTTCGGCACCGCCGAAGCCACAGCTGACGTACGCCAGTTCAGCAACAACAACCGTGTCGACAACTGGTCCACCCAGAACTCAGC
Amino Acid Sequence
>autotransporter adhesin
MKHTLLILVTLCSTSTFAQSPVPVINNADIDSSGSRYQGNLSVNQAAGDQQQQANARAFAVGPEASATTQIRQRLNTPAAPTMNARSTIQGDAFSNGSGA LGVNQSAGANTQQANALSISIGAQPQTIDDSVLMQQNVALLNNSGPIDTSTGHRQVTTSDQAFTGSRGVIQLNQSAGVGNRMANTLSIRVAD
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site