Pseudomonas putida KG-4, V520_RS22210
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida KG-4 contig00031, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCCAACTGCTGCTGCGCGAGAACGACCAGGGGCTGTTGCTGGCCGTACGCCGGGGCGACGTCACACTGTTCCCCACCTCGGCCTCGCCACGTCGGGTGCT GCCAGGCGAAACCTTGCAGGTGTGGGCCAGCGGCAGCTTCCAGGCGGTGACGCTGCACAGCGACCCCTGGGGCTGGACCGACGGCGTGCTCAGCGTGCAG CAGATGCCGCTGGGCGAGTTCATCGCCGAGCTGGCGCGCTACCGCCCGGGCCTGCTGCGCTGTGCCCCGGAAGTGGCAGCCCTGAAGGTGTCCGGTATCT ACCAGCTGGCCGACACCGGGCAAATCCTGCAGCTGCTCACCCGCAGCCTGCCGGTGCGGGTCGACTACCGCACGCGTTATTGGGTGAGCATCGGTACGGC CTGAAAAATTTCCGAAAATAAATGAGGTGGAATCTCATTCTCGTCCGGCCTGAAGGAACAAAACCCGAAAAGTGGTCTTCACGACCTTCAGGAGCGCTTC
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| DNA Sequence for Gene |
>V520_RS22210
ATGATTGCCCCGTGTTCCCCTCGCAACGACAGGCTGCGCCGTGCCGTAAGCGCGGCCGTGTTCGGCCTTGGCCTGGCAGCTGGCGGTGCCTACCCGGCCA TGGCTCAGGCTGCAATTGCCAGCCAGAGCCAGCAGACCGACTGGAACATCCCGGCCGGCCCACTGGCCCCGGCGCTGGACCAGTTGGCACGCCAGGGCGG CCTGAGCCTGTCGTTCGACGCGAACAGCCTGCAGGGCAAGACCACCCACGGTGTGCAGGGCCGGCATGACAGTGCGCGGGCGCTATCGATCCTGTTGCAG GGCAGCAACGTCCAGGTCCAACAGGAAAGCGCAACCAGCTTCCTGCTGATCCCGGCACTGGATGTGGGAAACGCCCTTGAGCTGGGCGCGACCAGCATTT CCAGCGACCGCCTGGGCGAAACCACCGAGCACACCGGCTCCTACACAACCGGCGAAGTGACCATCGGCAAGATGCCGCAAACCCTGCGCCATACCCCGCA ATCGGTCAGCGTGATAACCCGCCAGCGCATCGACGACCAGAACATTACCAACCTGACTAACCTGTTGGAGCAGACACCCGGCGTGGTGGTCAACTACACC GACAGCGAGCGGGTGCAGTATTACTCGCGCGGCTTTGCCATCGACGCCATTCAGTACGACGGCGCCACCGTGGTGCAAAGCAGCGGCGGTGGTTCATTCA TCCAGACCGACTCGGCGTTCATCGACCGCGCCGAAGTGCTGCGCGGAGCCACCGGCATGCTGCGTGGCGCCGGCAACCCGTCGGGCACGGTGAACCTGGT ACGCAAGCGCCCGACCCATGACTTCCAGGCTACGGGCAGCGTGACCCTGGGTTCGTGGAATGCCCAACGCTATGTGGCCGATATCTCCGGCCCGTTGACC GAAACCGGCAACGTACGCGGGCGGGTAATCGCCGTGCATGACGACCGCGACCTGTTCCAGGACTCGCGCATGGAACGCAAAGAGGCGTTCGGCGGCTCGC TGGCCTTCGACCTGGACGACAGCACCACGCTGACCACCGGTGTCGAGTGGACCAAGCTCGACGCCACCGGCGCCTGGGGCAACCTGCCCGCCGACGCCAG CGGCGCCCCCCTGCCCTTCGGCCGCAGCACCTACCTGGGCGCCGACTGGAACCGCTGGGACCGCAGCAACCTGAACACCTTTGCCGAACTGGAACACCGC TTCGACAACGACTGGACCCTGAAGCTGATGGCTCTGCGTACCCACTTCGAGCTGGACGACCATGGTTTCAAGCAAACCTACATGGAGCGCGCACCGGCCA ACCTGAACCCCACCGGCAACCCGTACCTGATGCGATACCAGGTTACCGAAGGCGACGGCGGCGAGAGCCTGCAGAACAACTTGAGCGCCACCCTCAACGG CCCGTTCGACCTGTTTGGCCGCACCCACGAGCTGATGGTCGGCGTCGAACGGATTCGCAACGATTCCTACGCGTCGGCCACCAACCGGGTAATTTCCGGG CTGTACGACATCCGCTACTGGGACCCGAAAACCAGCCTGCCCGAGCCGGAAATCGACATCACCGCACACCCGGTGCGCACCCGTACCACCCAGCAAGCCG CACATGCCACCTGGCGCATTTCGCTGGCCGAACCGCTGACCGCGATCATCGGCGCGCGAGCCAACTGGTATGACTACGAGCAGGAAAACAACACCGGAGC CAACGGCAAGTTCAGCGTCGACGAGAAGATCGTGCCGTACGCGGCGCTGATCTACGACCTGAATGACAACTTCAGCGTATACGCCAGCTACACCGAGATA TTCAGCCCGCAGACAGTGGTGGACAAGAACAACTCGGTGCTCGACCCGATCATCGGCGAAGCCTACGAAACGGGCATCAAGGGCGAGTTCTATGATGGCC GGTTGAACACCAGCCTGGCGTTTTTCCGTATCAACCAGGTGGGAACGCCGGTGGATGACATGTCCACGGAAATCGGCTGCAACGGCACCACCAGCCGCTG CAAGATCGCCTCGGGCAAGAGCCGCAGCGAGGGCATCGACCTGGAGATTTCCGGCGAAGTGCTGCCGGGCTGGCAGGTCACCGGTGGCTACACCTACAAC ACCACCGAGTACCTGAAGAACACGGCAGCCACCAATGGCAACGCGATCCGCACCACCGACCCGGAGCACATGCTGCGGCTGTTCACCAGCTACCGCCTGC CAGGCACGCTGGATGCCTGGACCATTGGTGGCGGCGTGCAGGCGCAGAGCGACATCTATTCCGAAAGCGGCACGGCCAAGGCGACCCAGGCAGGGTATGC GGTGTACAACGGCATGCTCGGTTATCGCATCAACGACAACTACTCAGTGCAACTGAACGCCAACAACATCTTCGACAAGAAGTACTACCGGCAGATCGGT ACCACGGCGACGGGTTACTACTGGGGGGAGCCGCGCAATGTGTCGGTGACCTTGCGCGGGAGTTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGGGGCAACACGGTCGCCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCGAAGCGGCCCCAGGGTTTCAACTGCGCCGGACAGATTGCTGGGGCCGC TTTGCGGCCCTTTCGCGACACAAGGCCGCTCCCACAGGTATTGCGCAGCCCTGGAGGACCTCAGTCCGCCACCGCCCGCAAGCGCCCCGTGCGCCGGTAC GACTGCCGGGCAAAGCACACGAACAACCCGGCCATCAGCGCCAGCGCGATGGGCAGACCATGCGGCGCCACATCCATCGCCGCACCGCTGACCAGCGGCC CGACCAGGCTACCCACACCCCAGAGCAAGCCCACGCTGGCGTTGGCGGTAACCAGGTCCTGCCCCTTGAAGCGCTGCCCGATCAGTACCAGCGCCAGGGT ATAGATGCCCCCTGCCACGGCACCCAGCAGCACCAGCAGCGGCCACAGCAGCCAGGTCAGGTTCAGCAACCAGGGCAAGCCGATACCGATCGCCATCGCC
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| Amino Acid Sequence |
>membrane protein
MIAPCSPRNDRLRRAVSAAVFGLGLAAGGAYPAMAQAAIASQSQQTDWNIPAGPLAPALDQLARQGGLSLSFDANSLQGKTTHGVQGRHDSARALSILLQ GSNVQVQQESATSFLLIPALDVGNALELGATSISSDRLGETTEHTGSYTTGEVTIGKMPQTLRHTPQSVSVITRQRIDDQNITNLTNLLEQTPGVVVNYT DSERVQYYSRGFAIDAIQYDGATVVQSSGGGSFIQTDSAFIDRAEVLRGATGMLRGAGNPSGTVNLVRKRPTHDFQATGSVTLGSWNAQRYVADISGPLT ETGNVRGRVIAVHDDRDLFQDSRMERKEAFGGSLAFDLDDSTTLTTGVEWTKLDATGAWGNLPADASGAPLPFGRSTYLGADWNRWDRSNLNTFAELEHR FDNDWTLKLMALRTHFELDDHGFKQTYMERAPANLNPTGNPYLMRYQVTEGDGGESLQNNLSATLNGPFDLFGRTHELMVGVERIRNDSYASATNRVISG LYDIRYWDPKTSLPEPEIDITAHPVRTRTTQQAAHATWRISLAEPLTAIIGARANWYDYEQENNTGANGKFSVDEKIVPYAALIYDLNDNFSVYASYTEI FSPQTVVDKNNSVLDPIIGEAYETGIKGEFYDGRLNTSLAFFRINQVGTPVDDMSTEIGCNGTTSRCKIASGKSRSEGIDLEISGEVLPGWQVTGGYTYN TTEYLKNTAATNGNAIRTTDPEHMLRLFTSYRLPGTLDAWTIGGGVQAQSDIYSESGTAKATQAGYAVYNGMLGYRINDNYSVQLNANNIFDKKYYRQIG TTATGYYWGEPRNVSVTLRGSF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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