Pseudomonas putida KG-4, V520_RS19500
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida KG-4 contig00022, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ACCCTGCAAGTCGCGCTGCGCCAGAAGCATCCGCAACTGGCGCCGGACCAGGCGCTGGACCTTCAGGCGTTCCTCGGCTTGCGGCATATCTGGGTACACG GTGGCCAGACCCGGGGCATGGTCGACCAATGGCTGGCCGAGCAAGGCCTGACCCGGCAAATTGCGTACACCACTCCCAACTACCTGCAAGCCGCGCATCT GGCCGCCGCCACCGAGATGTGCGTGGTGCTGCCGCGGCAACTTGCACAGCAGTTCGCGAAGTTGCTGCCCCTCACGGTGCACGAACTGCCCTTTGCCCTG GAGCCGTTCGAGCTGGAACTGGTGCATCTGACCCACCGCCGGCACGACCCCGCCCTTGCCTGGCTGGTGGAGCAGATCCTGGAGCTTCCGCCTGCCTGAG GCCATCAGCAAATGCGATGGCAACCATGCCGCTCTGGTATTGGCTGGTGCCCGAACCGGTCCCCTACAGTGGTCCGCCCCGATAACAACAAGGACACACC
|
|
| DNA Sequence for Gene |
>V520_RS19500
ATGCGCTTCCCACTGTCGATGCTGGCGCTCGCCCTGCTTGCGCCCCTCCCGAGCCTGGCCACTACGGCGGCAAAGGACGCCACCCCGGCCACCCAGGCCA GCAACCAGCAATGGCTGCAACGCCTGCCCTTCGATGACCACCGGGATTTCGAGGCGGCCCGGCGCGGGCTGATCGAACGCTTCGACGGGCCGGTCGCGAC CGCCGATGGCAAGACAGTGTGGGACCTGGGCCAGTACCGTTTTCTCGCCCCGGCGCAGGCCCCGGCCACGGTAAACCCGAGCCTGTGGCGCATCGCCCAG CTGAACACCATCGCAGGGCTGTTCAAGGTCACCGAAGGCATCTACCAGGTTCGCGGCCTGGACCTGGCCAACATGACCATCGTCGAAGGCCAGGACGGGC TGATCGTGCTCGATCCGCTGCTGGCCGTCGAAACCGCCAGGGCTGGCCTTGAGATGTATTTCCGGCACCGCCCGCGCAAGCCGGTGACCACGCTCATCTA CACCCACCCACACATCGACCACTTCGGCGGCGCGCGCGGGGTGATCGACGAGGCGGACGTCAAGGCCGGCAAGGTCCAGGTCATTGCACCTGAAGGCTTC TTCGAGCATGCCATCGGCGAGAACGTGCTGGCCGGTCCGGCCATGAAACGCCGCGCCCAGTATATGTACGGTGCCCCACTGCCCCGCGGGCCACGCGGCC AGGTGGATGCCGGCCTGGGCAAAGGGGTACCGGCCAATGCCACCGTCAGCCTGATAGCGCCGACGCTGGAAATCAGCCAGCCGCTGCAACGCATGACCCT CAGCGGCGTGGAGGTAGAGTTCCAGTTGACCCCGGGCACCGAAGCGCCAGCAGAGATGAACATCTACTTCCCTGGGCTCAAGGCATTGTGCATGGCCGAG AACGCCACCCACGTGCAGCACAATGTGCTGACCCTGCGCGGGGCGCTGGTGCGCGACCCGAAAGTCTGGGCGCACTACCTGGACCAATCGCTGTTGCGTT ACGGCGACCAGGCCGAGGTGGTGTTTGCCCAGCATCACTGGCCGACCTGGGGCGGGCCGGCAATCCGCGAATACCTGGCTGACCAGCGTGACATGTATGC CTTCATCGATAGCCAGACCTTGCGCCTGATCAACCAGGGCCAGACACCGATGGAAATCGCCCAGAGCCTGGCCAGCCTTCCGCCGCGCCTGGCCAGCAAG TGGTACAGCCGCGACTACTATGGCTCGCTCAGCCATAACGTCCGTGCGGTCTACCAACGCTACATGGGCTTTTACGATGGCAACCCGGCCAACCTCGACC CACTCCCGCCGCAAGCTGCCGGCAAGCGCTACGTGGCGGCAATGGGTGGCGCCGATCAGGTGCTGTCCCAGGCACGCCAAGCCTTTGCCGAAGGTGACTA CCGCTGGGTCGCGCAGCTGGTGAACCATCTGGTATTCGCCGAGCCGGGCAATACCGCAGCGCGCGAGCTCCAGGCCGATGCGCTGGAACAGCTGGGTTAC CAAAGCGAGAACGCTACCTGGCGCAACGCCTACCTCAGCGGCGCCCAGGAGCTGCGCGGTGGAGTAGCCGCCGCCACCGGCAGTGGCGGCAATGCCGACG ACATGGTGCGGGCACTGACACCCAGCCTGTTCTTCGATTACCTGGGGGTACGAGTGGATGCCTTCAAGGCGGCGGATAGCGACCTCAGCATCAACTGGCG CTTCACCGACCTGGGCGAAGATTACGCCCTGACCCTGCGCAACGGCGTGCTCACCCATCGCGACCTGACTCGTCACGCCCAGGCCGATGTGCAGGTGAGC ATGAGCAAACAGACGTTGGACCGCATTGCCCTGAAGCAGACCGGGTTCCTCAAGGAGGCCACCCTGGGCGAAATCTCCATCGAGGGTGAGCGGGTGAAGT TCCTGCGCTTCATGGGCGGCCTGGAGAACGCCGATTCCCGTTTCAACATCGTGACCCCTTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCCCCGGCGTCTTCGCCAGCAAGCCCGCTCCCACCGGTACCGTCTTGGCTTTCAGACTCACATTGTACCTGTGGGAGAGGTTTCAGCCCCCGTTCGCCAA GCGGTACAACCCTGCCAGCGCCATCAGGCACACCCCGCCACCCAGCGCCAATACCGGCAGAATCGCAGGCTGACCGCGCTCGGCGCACAACATCGCCAGG CCCTCGCTGTAGCGCCGCCCCTGGCGGGCCAACAGCATCAGCGTTGCGCAGCCCACCAGTGCGGCCAGCGGCAGGTCGCCCTGTCGCAAAGCCAGCCCCG CGACTGCCACCAGCGCCAGCCAGGTACGCCGCCAGGCCAGTTCGGTGCGTTCGGCCTGCAAACCCGGGTCAAGCATGCCAACGCGGCCACAACACGGCAG CGGCCATCAATGCCGCGACCAGGCAACCCAGTGCCAACATCGGCACCAGCGCTGGCAGCGGCAATGGCCGGCGTTGGCGCAAGGCACGCTCCACCCGCAG
|
|
| Amino Acid Sequence |
>alkyl sulfatase
MRFPLSMLALALLAPLPSLATTAAKDATPATQASNQQWLQRLPFDDHRDFEAARRGLIERFDGPVATADGKTVWDLGQYRFLAPAQAPATVNPSLWRIAQ LNTIAGLFKVTEGIYQVRGLDLANMTIVEGQDGLIVLDPLLAVETARAGLEMYFRHRPRKPVTTLIYTHPHIDHFGGARGVIDEADVKAGKVQVIAPEGF FEHAIGENVLAGPAMKRRAQYMYGAPLPRGPRGQVDAGLGKGVPANATVSLIAPTLEISQPLQRMTLSGVEVEFQLTPGTEAPAEMNIYFPGLKALCMAE NATHVQHNVLTLRGALVRDPKVWAHYLDQSLLRYGDQAEVVFAQHHWPTWGGPAIREYLADQRDMYAFIDSQTLRLINQGQTPMEIAQSLASLPPRLASK WYSRDYYGSLSHNVRAVYQRYMGFYDGNPANLDPLPPQAAGKRYVAAMGGADQVLSQARQAFAEGDYRWVAQLVNHLVFAEPGNTAARELQADALEQLGY QSENATWRNAYLSGAQELRGGVAAATGSGGNADDMVRALTPSLFFDYLGVRVDAFKAADSDLSINWRFTDLGEDYALTLRNGVLTHRDLTRHAQADVQVS MSKQTLDRIALKQTGFLKEATLGEISIEGERVKFLRFMGGLENADSRFNIVTP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|