Pseudomonas putida KG-4, V520_RS19185

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida KG-4 contig00021, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ATCGCCGCCCGCGACCGTCTGCAGCCCTCGCTGCTGGACCGCCTGACCGACGACGACCCGGGCAACCCGCAGGAAGCACCGGACAAGCGCGTGCTCAGCC TACACCAGCTCAAGGCCTCGGTACTGCGCGACCTCGCCTGGTTGCTCAACACCACTTCGCTGCTCGACAGCGCCGCCACCCTGGGCACCCCCGCCGGGGC TTCGGTGATCAACTACGGCCTGCCGGCCCTGGCCGGCAACAGCGCCTCGAACATCGACCTGGCCGCCCTGGAGCGCATCATCCACCAGGCCATCGCCACC TACGAGCCACGTATCCTCGCCCATACCCTGAAGGTGCGTGCCCAGGCCGCACCCGGCGAGATGAATGCCAACGCCCTGAGTTTCGAAATCGAAGGCGACC TGTGGGCCCAGCCAGCGGCCTTGCCGTTGCTGCTGCAGACCGAGGTGGACCTTGAGTCCGGCCATGTGCGCGTGGCCCCTGCCGAACGCCGGAGGCGTGC
DNA Sequence for Gene
>V520_RS19185
ATGAACCCACGCCTGCTCGAGCTGTACAACCAGGAGCTGCAACACATCCGCGAGAGTGCGGCGGAGTTCGCCCGAGAATACCCGAAGATCGCCGGGCGCC TGACGCTGTCCGGGATCGAGTGTGCCGACCCCTATGTCGAGCGCCTGCTCGAAGGCTTCGCCTACCTCACCGCGCGGGTGCAGCTGAAGCTGGATGCCGA GTACCCGACCTTCACCCACAACCTGCTGGAGATCGCCTACCCGCACTACCTGGCGCCGACCCCGTCGATGACCGTGGTGCAACTGCAGACCGACCCCGAC GAGGGGTCCCTGGCCGCCGGGTTCCGCCTGCCGCGCGACAGCGTGCTGCGCGCCAACCTGGGGCGCAACTCGCAGACCCCGTGCGAGTTCCGCAGTACCC AGGACGTCACCCTGTGGCCCTTGCAGGTAGCCCGCGCCGAGTACTTCGGCAACCCCGGCGCGGTGCTCGGGCGCCTGGCCAGCAGCGTGCCGCAAGCCCG CGCCGGCCTGCGCCTGACCCTGCGCAGTGGCGCCGAGTTGCCGTTCGCCAGCTTGCCGCTCAGCCATCTGCCGTTGTACCTCAACGGCGCCGACGAGACC CCGTTCCGTCTCTACGAGCAACTGCTGGGCAGTGCCTGTGCGGTGTTCGTGCGCCAACCCGGCGCCGATTGGGTGGAACGTATTCCGGTCGAACAGGCAC TGCGCCCGTGTGGCTTCGATGACCGTGAAGCGGCGTTGCCGGTGGTGCCCCGGGCCTTCCAGGGCTACCGCCTGCTGCAGGAGTACTTCGCCCTGCCGCA GCGCTTCCTTTTCGTCGATTTTGCCGGGCTGGAGCAGGCCGTACAGCGCTGCACCGGCCAGACTCTGGAAGTGCTGGTATTGTTCGAACGCTTCGACCAG AGCCTGGAGAGCAGCGTCGGCGCGAGTCAGTTCGTGCCGTTCTGCACCCCGGCGATCAACCTGTTCCCGCGCCGTGTCGACCGCCTGCACCTTTCCGATC GGGTGCATGAACACCACGTGATCGCCGACCGCACCCGGCCCACCGATTTCGAGATCCATTCCCTGCAGCGGGTCACCGGCCACGGCACCGGGCCGGATCA GGAATTCCTGCCGTTCTACGCGGTGCGCGACCCGTCGCGCTACGGCCGCGACCAGGCCTACTACATAGTGCGCCGGGAGCCGCGGGTGTTGTCCAGCGAC CAGCGTCGCAATGGCACCCGCTCCAGCTACATGGGCAGCGAAACGTTCATCAGCCTGGTCGACGGCCAGCAGGCCCCCTACCGCCACGACCTGCGCCAGC TGGGTATCAGCGCCCTGTGCAGCAACCGCGACCTGCCTCTGTTCATGAGTGTTGGCGACGGGCGCAGCGACTTCAGCCTGGCCGACAGCGCACCGGTCGC CGGCGTGCGTTGCCTGGCCGGCCCAAGCCGGCCGAAGGCCAGCCATGCCCATGACAACCGCGCCTGGCGCCTGATCAGCCAGCTGTCGCTGAACTACCTG TCGCTGGCCGAGCACGGCCAGGGCGCCGCCGCCCTGCGCGAATTGCTGCGCCTGTATGGCGACCCGCAGGACAGCGCCCTGAACCTGCAGATCGACGGCC TGCGCGACGTCAGCAGCAAGCCCTGCACCCGACGCCTGCCGATGCCCGGGCCGATCGTTTTCGGGCGTGGCCTGGAGATAACCCTGACCTTCGACGAAAA CGCCTTCCGCGGCACCGGCGTGTTCCTGCTCGGCGCGGTGTTCGAGCGTTTCCTGACCCGCTACGTGTCGATCAACAGCTTCACCGAAACGGTACTGCGC ACCAGCGAACGCGGCGAGATCATGCGCTGGTCGGCCAAACCGGGGCGCAGGCCGACCCTATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACACCTTGCAGGCCATGCAGGACGAGCCCTGGGCGTACGATTTCTTCCAGGCGCTGCGCCGCCTCGAAGCGCAATACCCCGAGCTGCCACGCTTCGGTCA TTCCCTGCGCCTGGCCGACGAGCCTGTGCGCCTGGGCCAGCGCCTGGACTGCGGGTTCGCCCCGTCGACCCTGGCCTCGGTCAGCGCCGACGGCAACCAG CCGGCGCGCCTGGAGCAGTTCTTCTTCGGCCTCGGTGGCCCCAACGGGCCGCTGCCACTGCACCTGACCGAATACATGCGCGAGCGCCAGCGCAACCATG CCGATTCGACCAGCAAGGCGTTTCTGGACGTCTTCCATCACCGCCTGCTGAGCCTGTTCTACCGTGCCTGGGCCGAAGCCCGGCCGACCGTCAGCCACGA TCGCCCGGGGGATGACTACTGGGCCGCGCGCCTGGCGGCGCTCAGTGGCCGTGGCCAACCCGAACTGCAAGGCCAGGGCGCACTGGCCGACACCGCCAAA
Amino Acid Sequence
>type VI secretion system protein ImpG
MNPRLLELYNQELQHIRESAAEFAREYPKIAGRLTLSGIECADPYVERLLEGFAYLTARVQLKLDAEYPTFTHNLLEIAYPHYLAPTPSMTVVQLQTDPD EGSLAAGFRLPRDSVLRANLGRNSQTPCEFRSTQDVTLWPLQVARAEYFGNPGAVLGRLASSVPQARAGLRLTLRSGAELPFASLPLSHLPLYLNGADET PFRLYEQLLGSACAVFVRQPGADWVERIPVEQALRPCGFDDREAALPVVPRAFQGYRLLQEYFALPQRFLFVDFAGLEQAVQRCTGQTLEVLVLFERFDQ SLESSVGASQFVPFCTPAINLFPRRVDRLHLSDRVHEHHVIADRTRPTDFEIHSLQRVTGHGTGPDQEFLPFYAVRDPSRYGRDQAYYIVRREPRVLSSD QRRNGTRSSYMGSETFISLVDGQQAPYRHDLRQLGISALCSNRDLPLFMSVGDGRSDFSLADSAPVAGVRCLAGPSRPKASHAHDNRAWRLISQLSLNYL SLAEHGQGAAALRELLRLYGDPQDSALNLQIDGLRDVSSKPCTRRLPMPGPIVFGRGLEITLTFDENAFRGTGVFLLGAVFERFLTRYVSINSFTETVLR TSERGEIMRWSAKPGRRPTL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site