Pseudomonas putida KG-4, V520_RS19150

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida KG-4 contig00021, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ATCCGCCGCACGGCCAAGCGTGATGGCACCGGTTTCCAGCCGCATCTCCGGGCATTGCCCGGGAGTAATCTTGTGGTAACTAGTGATAGTTAGGCACAGT GCCATCACGCCTCCATGCATCCATTTAAAACACCGATCCATCCATTTGAGTTATTTTTCAACAGCCACTCAAATATGGCTGAACCCCTTGATTTACGGGG CTTCACGCCTGCAACCGAACATACGACGGCTATTCAACGCTAACGCCGAGGTTAACTGAATGGAATCGGACGAGCGGTGCCCGGTTACTGCCAACGAATT CACAGCTGGCACTCGAGGGCGCGTAGCTTACCTTGACACGCGCGAATAAATAAACCATAAATGCGCAACTTCGAAGTGCCAAAATAATATCACCATGATA TCACCCCGGCACTCTTTGGAAAGTTTGTGCGCCAGTTCACATTTGCAACTTCGCACAACAACACGCCCTCACCAAGGGCCGATATGGAGATCGAATTCTG
DNA Sequence for Gene
>V520_RS19150
GTGAATGCATCGCCGCTGCTCGCCGCTGTTTCCGCTGACTTCCCCTGCGGCGATGACCTGGAATATGACGCCGAGTTTCTGCAACTGGAACGTGACGCCC AGGGCCGCCCCGAGCGCGTCATGGGCGACGCCGTCCAGCCTGCCGAGCCACCGCAGTGGCGCGATATCGAGCAGGCAAGCACGGCCTTGCTGCAACGCAG CAAAGACCTGCGCATCACCCATTTTCTGCTTCAGGCCAACCTGGCCCTGCACGGCCTCCCAGGGCTTGCCGCCAGCCTGGAACTGATCCGCGATCTGCTC GGCGAGTACTGGCTGCACCTGCACCCGCAACTGGACGCCGCCGACGACAATGACCCCACGGTACGGGTCAACGCCCTGGCCGGCCTGGCCTGCGACACCA ACATCGCGCTGCTGCGTGACGCGGTGCTGGTGCGCTCGCGTGCCTTCGGCCCGGTTACCCTGCGCGCGGCGCTGCACGCCGCAGGTGTTCAGCATTTCGC CAGCGAACAGCTCAGCGCCGAGGAACTGGCCGCCGCCCTGCGTGATGCCGACCCCGACCAGCTGCAGCAATGCCAAGAAGCGCTACAGCTGGCCCGCGAG GCCGTGGACGCCATCGAGAGCCGAGTCAACGACCAGGTCGGGTCGGCCAGCGGTATCGACTTGTCAGCCTTGCGCCAGCCGCTGCGCCTGGTGCAGCAGG TACTGGCTGACTACTGCCCCGACGGTGCGGGCCCTGCCCCGCAAGCCGGTGACACACCGGCTGCGGAGCGCGATGACGAACAGCAGGCGACCGCCAGCGC CGGCCCCGGCACACGGCCGGCTGCCCGCCCCGGCGAAGTCAACAGCCGCGAAGACGTGCAGCAGAGCCTTGACCGCCTGTTGCAGTACTACGCCCGCCAC GAACCATCAAGCCCACTGCCGGTACTGCTACACCGGGCGAAGAAGCTGGTCCATGCCGATTTCGCAACCATTGTGCGCGACCTGATCCCCGATGGCTGGT CGCAATTCGAGAACCTGCGCGGCCCCGAGGACAACTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CGTCCTCGGCCCGCATCAACACCGACGCCCGCAACGAACAGCGCCGCCGTACCGGCGACCAGGAGGAACAACGTGGCGAAAGACAGCTCCCAGAAATTCA TCGCGCGCAACCGTGCGCCGCGGGTGCAGATCGAATATGACGTCGAGCTCTACGGCGCCGAGAAGAAAGTCCAGTTGCCGTTCGTCATGGGCGTGCTGTC GGACCTTGCCGGCAAGCCGGCCGAGCCGCTGCCAGCGGTGGCCGAGCGCAAGTTCCTGGAAATCGACGTCGACAACTTCGACTCGCGCCTGAAGGCGATG AAGCCACGCGTGGCCTTCAACGTGCCCAACGAACTGACCGGCGAAGGCAACCTGAGCCTGGACATCACCTTCGAGAGCATGGACGACTTCAGCCCGGCCG CCGTGGCACGCAAGGTCGACGCCCTCAACCAGCTGCTCGAGGCCCGCACCCAACTGGCCAACCTGCTGACCTACATGGACGGCAAGACCGGTGCCGAGGA
Amino Acid Sequence
>type VI secretion protein ImpA
MNASPLLAAVSADFPCGDDLEYDAEFLQLERDAQGRPERVMGDAVQPAEPPQWRDIEQASTALLQRSKDLRITHFLLQANLALHGLPGLAASLELIRDLL GEYWLHLHPQLDAADDNDPTVRVNALAGLACDTNIALLRDAVLVRSRAFGPVTLRAALHAAGVQHFASEQLSAEELAAALRDADPDQLQQCQEALQLARE AVDAIESRVNDQVGSASGIDLSALRQPLRLVQQVLADYCPDGAGPAPQAGDTPAAERDDEQQATASAGPGTRPAARPGEVNSREDVQQSLDRLLQYYARH EPSSPLPVLLHRAKKLVHADFATIVRDLIPDGWSQFENLRGPEDN
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site