Strain | Pseudomonas putida KG-4 contig00021, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TACCTGGTCAGCCCGTTGTGGCGCTTTGCCCTGGCGCCTGGTGTGTGTGGCCCGGATGCGGTGGTTGGCGTGCTGATGCCGAGCATTGACCGGGTGGGGC GGTATTTTCCGCTGAGCGTGGCGCAGGTGCTGGAGCCCGGGGTGGCGATCGCAGGCATCGTTGGCGGGGCCGATGAGTGGTTCGAAGGTGTCGAGGCGGC GTTGCTGGGCACGCTTGAAGCGGATGCAGCCTTCGAGCACTTCGAGGCAGCCTTGCAGCCTTTCGACCAACCCCGGCCGCTGCTGCAGGGGGCACGTGTG GCCGTGGGCGGGTTGCAGCGGCTGGACGGCATCACACCGCAGGGCAGGGCGTTGGCACTGGCCGAATGCGCCTGCGAAGGCATGAGCCTGTGGTGGGGGC TGGGCAGCGAGCGGATCGCACCTGGCCTGCTGCGTAGCCAGGGCCTGCCGCGCAGCGACCAGTTCGCCGCGTTCCTGCTGGGCAGCGAGGCAATACCAGC
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DNA Sequence for Gene |
>V520_RS19115
ATGAGCCGGGTGCACTACAGCGCGGCCAGTTACAGCCATGTAGGCATGGTCCGCAAGATCAACGAAGACGCCTGCCTGGAGCTGACCTGGGATGGCCTGT GGGCCGTTGCCGACGGCATGGGTGGGCATGCCGCCGGTGACTATGTGAGCAGCCTGGCCGTGGACAGCCTGCGCCAGTTGCCGCTCGTCGATGGGCTGGA GGATTTCACCCAGGCCCTGCGTGACACCCTGGCACGGGTAAACCGCGCCGTGCGCGAGGAGACCTTGCGCCGGGGCGTGGCGATGATGGGCAGCACGGTG GTGGTCCTGGCGGCCCGTGGGGACCGCGCCGTAGGCCTGTGGGCCGGGGACAGCCGGCTGTATCGGCTGCGCGATGGCTGCATCGAGCGCCTGTCGCATG ACCACAGCTACGTCCAGGAACTGCAGGACAGCGGCCTGCTCAACGAGGCCGAAGCCCGCGTGCACCCGCGCGGCAACATCGTCACCCGCGCCATCGGCGT CGAGGACCAGCTTGAGCTGCAGGCGGTGGATGTGCAGGTAAAGCCCGGCGACACCTATCTGCTGTGCAGCGACGGCTTGAACAAGACCGCCGAAGACCAC GAGATCGCCGACGTGCTCGGCCACGCCGACCCCTATCAAGTGGTTCGCAGCCTGGTGCACCTGGGGCTGACCCGTGGCGCCCCTGACAACATCACCGCCG TGGTGGTGAAGGCGAATTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AGAGCACACCGAACATGCAGATTCCCGGATTCGACATCGACAGCGAGATTGGCCAGGGCGCCATGGCCAGTGTCTATCTGGCCACCCAGCGCTCGCTGCA GCGCAAGGTGGCGCTGAAGGTGATGGCCGCGAGCCTTGCCGCCGACCCCACCTTCTGCGAGCGCTTCCTGCGCGAAGGGCGCACCTTGGCGCGGCTGGCG CACCCGCACATCGCCACCATCCATGACATCGGCAACGTCGGCGAGCTGTACTACATGGCCATGGAGTACCTGCCCAGCGGCACCCTCAAGGAGCGCATCG CCGCCGGGCTTGCCCCCGAGCAGGGCTTGCTGTACGTGCGGCAGATCGCCCAGGCGCTGGGTTATGCCCACGGCCAGGGGTTGGTGCACCGCGACGTGAA ACCGGCCAACATCCTGTTCCGCGCCGACGGCACGGCAGTGCTCTCGGACTTCGGCATCGCCAAGTCGCTGGATGACCGCACCCAGTTCACCCAGGCTGGC
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Amino Acid Sequence |
>serine/threonine phosphatase
MSRVHYSAASYSHVGMVRKINEDACLELTWDGLWAVADGMGGHAAGDYVSSLAVDSLRQLPLVDGLEDFTQALRDTLARVNRAVREETLRRGVAMMGSTV VVLAARGDRAVGLWAGDSRLYRLRDGCIERLSHDHSYVQELQDSGLLNEAEARVHPRGNIVTRAIGVEDQLELQAVDVQVKPGDTYLLCSDGLNKTAEDH EIADVLGHADPYQVVRSLVHLGLTRGAPDNITAVVVKAN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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