Pseudomonas putida KG-4, V520_RS17795
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida KG-4 contig00018, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGCGGTAGCGTGCGCAAGCGACCCTACTGGCTGACCCCAGGGGAGGGCGCGTCTCTGTATTTCGCGGCTGTGTGGGAGGCTTACCCGGTGCAGGACCAGG TTTGGCTGAGTTGTGCGGTAGTGACCCAGGCGGCGATGAGTCAGCGTCGGCCACTGATAATGGACGATGCGGGGCAGGCGGCCTGGCTTGACCCGGGCAC GCCGCTGGCCCGCCTGCATGAGTTGCTGGCCAGCCCGCCGGCGACCTTGCGCGAGCGGGCCCTGGCGCATTTTGTCAATGACCCGAAGCTGGATGCGCCG GAGTGCCTGACCCCGGCCTGATGTATGCCTGTGCCGGCCTCTTCGCCGGTGAAGCCACTCCTGCAACGATCGCATTGTCCCTGTAGGAACGGGTTCACCC GCGAAGGGGCCGGCACAGGCGACGAAAATCTTCCCTGCGGCTATAGCGGCCCCAAGCGACTCGGCCTACGATACGGCGCATGTAAAAAGGGAGTGTTTTC
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| DNA Sequence for Gene |
>V520_RS17795
ATGCGTAAGTCTTTTGTCGTCAGCCTGTTGAGTGCTGGCATCCTGCTAGCCGGCTGCCAGGCGGTGAATACCACCAGTGGCGGTGCTGTCGGCGTCGAGC GCCAGCAGTACATGTTCAGCATGCTCTCGACCGATGAGGTCAACCAGATGTACGCCCAGTCGTACCAGCAGACCCTGGGTGAAGCATCGAGCAAAGGCGT GCTCGACAAGTCCAGCGCTGTTGCCAAGCGTGTGCAGGTAATTGCCAACCGCCTGATCGCCCAGACCCCCAAGTTCCGCCCGGATGCCGCGCAATGGAAC TGGGAAGTGAACGTGATCAAGAGCGACGAGCTCAACGCCAACTGCGGCCCGGGCGGCAAGATCATCGTCTACACCGGGCTGATCGATCAGCTCAAGCTCA ACGATGCGGAAATTGCTGCGGTGGTGGGTCACGAGATCGCCCACGCTCTGCGTGAGCACAGCCGCGAGGCGATGTCCAAGGCGTACGGTGTGGAAATGGC GCGCCAGGGCGCCGGCGCCCTCTTTGGCCTCGGCCAGGGTAGCATGGCCATGGCCGATACCGTGGTGAACTATGCCATGACCCTGCCCAACAGCCGGGCC AACGAGAACGAAGCCGACCTGATCGGCCTGGAGCTCTCGGCGCGTGCCGGTTACGACCCGAATGCCGCGATCACCTTGTGGAACAAGATGAGCCAGGCTT CCGAAGGCGCCCCGCCTGAGTTCATGAGCACTCACCCGGCGTCCCAGAGCCGCATTGCTTCGTTGCAGGCGGCCATTCCGAAGGTGATGCCGCTGTATCA GGCGGCCAAGAAGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCTCGACTTCCAGATGCTTACCCCTTGTAGGAGCGGCCTTGTGCTGCGAAAGGGCCAGTAAGAGCACCACATTTCCTGGTGCCTGTACCGGCCTCTTCG CAGCGCGAGGCTGCCCCTACAGGTTCGGCGTCAGCCTGTCGCCTTACGGGTTAGCCCACCCAGCCACTGGCTTTCATCGCCGTGTACACGGCCACGATCG CCAGCACGAAGAACGCCGTGGCCGCCAGGCGACGGATCAGCGTCAGCGGCAGTTTGTCCGCTGCGAAGTTACCCGCCAGTACCACCGGCACGTTGGCAAT CAGCATGCCCAGGGTGGTACCGATAATGACCATGATCAGGTGCGGATACTGTGCTGCCAGCATCACCGTGGCGACCTGGGTCTTGTCACCGATTTCAGCC AGGAAGAACGCGATCAGCGTGGTCAGGAACGGCCCGAAGCGGCGCGCCGGGTTCTCGTCGTCATCCATCTTGTCCGGAACCAGGGTCCACAGGGCAGTAG
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| Amino Acid Sequence |
>peptidase M48
MRKSFVVSLLSAGILLAGCQAVNTTSGGAVGVERQQYMFSMLSTDEVNQMYAQSYQQTLGEASSKGVLDKSSAVAKRVQVIANRLIAQTPKFRPDAAQWN WEVNVIKSDELNANCGPGGKIIVYTGLIDQLKLNDAEIAAVVGHEIAHALREHSREAMSKAYGVEMARQGAGALFGLGQGSMAMADTVVNYAMTLPNSRA NENEADLIGLELSARAGYDPNAAITLWNKMSQASEGAPPEFMSTHPASQSRIASLQAAIPKVMPLYQAAKK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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