Strain | Pseudomonas putida KG-4 contig00017, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
AACGCCCTGGCCACCCTGGCAGCGGCGCGCCATGTAGGGGTGGTGCCAGCCATGGGTATCGAAGGCCTGAGCGCCTTCAAGAGCGTCAAGCGGCGCATGG AAAAGGTTGCCGAAGTGCAGGGCGTTACCATCTACGATGACTTCGCTCACCACCCGACCGCCATCGCCACCACACTCGACGGCCTGCGCAAGCGCGTTGG CGAGGCCCCGGTGATCGCCGTGATCGAGCCACGCTCCAACTCGATGAAGCTCGGTGCCCACCGTGATGGCCTGCCGGAAAGCGTCAACGACGCCGACCAG GTGATCTGGTACGCTCCGGCCAACCTTGGCTGGGACCTGGCTGCAACCGCCGCGCAATGCAAAGTGCCCAGCGTGGTGGCCGACAGCCTCGAAGCGATCA TCGAGCGGGTCAAGGGCCAGGCCCGCCCAGGTACCCATGTAGTGATCATGAGCAACGGCGGCTTCGGCGGCCTGCACGGCAAGCTGGCCGAGGCACTGAA
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DNA Sequence for Gene |
>V520_RS17490
GTGAGCGGGCCGGAACGCATCACCCTGGCCATGACGGGGGCCTCTGGCGCCCAGTACGGCCTGCGCCTGCTCGATTGCCTGGTGCGGGAGGACCGCGAGG TGCACTTCCTGATCTCCAAGGCCGCGCAACTGGTGATGGCCACCGAGACAGACGTGGTGCTGCCGGCCAAGCCACAGGCGATGCAGGCCTTCCTCACCGA ATATACCGGCGCTGCCGACGGTCAGATCCGCGTGTATGGCAAGGAAGACTGGATGTCGCCGGTGGCCTCCGGCTCCGGTGCCCCGGCGGCAATGGTCGTG GTGCCCTGTTCCACCGGCACCTTGTCGGCGATTGCCACCGGTGCCTGCAACAACCTGATCGAACGCGCTGCCGACGTTACCCTCAAGGAGCGTCGCCAGC TGATCCTGGTGCCGCGCGAGGCGCCGTTCTCCACCATACACCTGGAGAACATGCTCAAGCTGTCCCAGATGGGCGCGGTGATCCTGCCGGCGGCGCCGGG CTTTTATCACCAGCCGCAGACCATCGACGACCTGGTCGACTTCGTGGTGGCGCGCATTCTCAACCTGCTGAACATTCCCCAGGACATGTTGCCGCGCTGG GGTGAGCACCACTTCGGGGTGGATGATTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AGCGAGCGCTGGCAGGTTTGCTGGCGCTGGTGCTGCTCGGTGGCTGTGCCACTGTGCGCACGCTGGATGCCAACAAGCCCGGGGCACCGGTGGTGTATGC CGGTACCCGGTTGGACTTGTATGTGATCAATGGCGGGTGCTGCCCGCTGGATCGTTACGGGGCTGATGCGCCGGCGTATCCGGGGCTGGACCTGCCCGGG AGCATGTTGCTCGATACCTTGTTGCTGCCGTTGTCGCTGCTCACTGCAGCCGGTGTAGGCTTCCAGGCCACCGGCGGCCTGTAAGGGCCCTTTCGCGGGC ACGCCCGCTCCTACAGTATCTGTGTAATCTTCATGTGATCACTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCATCACAAGTGAAGCCTATTTCT TGCCCAACCTGCGCAACTCATCCGACTCCACAATCCGCACCCCGTCTTCCTCCTCCAGCGCCAGCCGCCACAGCGCCCGGGCCAATGTACAAGCCTCGAT
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Amino Acid Sequence |
>aromatic acid decarboxylase
MSGPERITLAMTGASGAQYGLRLLDCLVREDREVHFLISKAAQLVMATETDVVLPAKPQAMQAFLTEYTGAADGQIRVYGKEDWMSPVASGSGAPAAMVV VPCSTGTLSAIATGACNNLIERAADVTLKERRQLILVPREAPFSTIHLENMLKLSQMGAVILPAAPGFYHQPQTIDDLVDFVVARILNLLNIPQDMLPRW GEHHFGVDD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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