Pseudomonas putida KG-4, V520_RS16905
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida KG-4 contig00016, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AAGGCAATGCCCATTCGCTGGCCATGGACCTGCACGACCAGCACACCTACATGGCCAAGACCGGCCAGTGGCGCTTCACCCCGCCGACTCACGTGGTCGC AGCCCTGCACGAAGCGCTGCAGCAATACAACGAGGAAGGGGGCCTGCCAGCGCGCCACCAGCGCTACGCCGACAACTGCAAGACCTTGCTCGATGGCATG GCCGCCATCGGCCTGCGCAGCTTCCTGCCTGCCGAGATCCAGGCGCCGATCATCGTCACCTTCCACGCACCGAACGATCCCCGCTACCAGTTCAAGGACT TCTACGAACGGGTCAAGGCCAAGGGTTTCATACTCTACCCGGGCAAGCTGACCCAGGTGGAAACCTTCCGTGTCGGCTGCATCGGCGTGGTCGGAGCGGA TGGCATGCAGGCCGCCGTGAATGCCGTGGCCGAGGTGCTGCGGGAAATGGAAGTGCTGGACATCTGACCCTTTGCCCACCCAATTCAGGAACAAGCACAC
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| DNA Sequence for Gene |
>V520_RS16905
ATGAACTACAGCAACCCCACCCAGCTGCAAGCCGCCATCCTCGACTGGGCCGGCACCGTGGTCGACTTCGGCTCCTTCGCCCCGACCCAGATCTTTGTCG AAGCCTTTGCCGAATTCGATGTGCAGGTGTCCATCGAAGAAGCCCGCGGCCCGATGGGCATGGGCAAGTGGGACCACATCCGCACTCTGTGCGATGTGCC AGAAATTGCCGAGCGCTACCGCAAGGTGTTCGGCCGTACCCCGACCGACGATGATGTCACCGCCATCTACAACCGCTTCATGCCGCTGCAGATCGAAAAG ATCGCCGTGCACTCGGCGCTGATCCCTGGCGCCCTGGACACACTCACCGGCCTGCGCCAGGAAGGCCTGAAGATCGGCTCTTGCTCGGGCTACCCGAAGG TGGTGATGGACAAGGTGGTGGAGCTGGCCGCGCAAAACGGCTATGTGGCCGACCATGTGGTGGCCACCGACGAAACCCCGAACGGCCGCCCATGGCCGGC CCAGGCCCTGGCCAACGTGATCGCGCTGGGTATCGACGATGTGGCGGCGTGCGTGAAGGTCGACGACACCGTACCAGGTATTCTCGAAGGCCGCCGCGCC GGCATGTGGACCGTGGCCCTGGTGTGCTCGGGCAATGCCCTGGGGCTGACCTGGGAAGGCTATCGCGCACTGAGCGCCGAAAAGCTGGAAAGCGAGCGCC AGCGCATCCACGCCCTGTTCGCCGGCTCCCGGCCGCACTACCTGATCGACACCATCAACGAACTGCCCGAAGTGATCGCCGACATCAACCGGCGCCTGGC CAAGGGTGAGATGCCACAAACATCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCCGGCCATGGGGGCCGCCTTGCGGCCCACCGCCGGCAAGCCAGCTCCCACAGGTCCAGCGACAATCTTGAGAACAACGCTGTATTTGTGGGAGCTGGCT TGCCGGCGATGGGCTGCAAAGCAGCCCCAGCAAGGCCCGCCCCTACTCCGGCAACTGCACCCGGGGTTTGGTTGCCGCAAAGATCGCCCAACTCGACACG AACAGTGCCGCGATCAATGGCCCGATCACGAAGCCGTTGAGCCCGAACACCGCCAGCCCGCCCAGCGTCGACACCAGAATCAGGTAGTCCGGCATTCGCG TGTCCTTGCCCACCAGGATCGGCCGCAACAAGTTGTCCACCAGGCCGATCACCAGCACGCCGAATGCGGTCAGGATCACCCCCGACAAAATTGCACCGGT CAGCAGGAAATACGCCGCTACCGGCGCCCACACGATCCCCGCACCTACCGCAGGCAACAGCGACAGAAACGCCATCAGCACCGCCCACACCAGCGCACTC
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| Amino Acid Sequence |
>phosphonoacetaldehyde hydrolase
MNYSNPTQLQAAILDWAGTVVDFGSFAPTQIFVEAFAEFDVQVSIEEARGPMGMGKWDHIRTLCDVPEIAERYRKVFGRTPTDDDVTAIYNRFMPLQIEK IAVHSALIPGALDTLTGLRQEGLKIGSCSGYPKVVMDKVVELAAQNGYVADHVVATDETPNGRPWPAQALANVIALGIDDVAACVKVDDTVPGILEGRRA GMWTVALVCSGNALGLTWEGYRALSAEKLESERQRIHALFAGSRPHYLIDTINELPEVIADINRRLAKGEMPQTS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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