Pseudomonas putida KG-4, V520_RS15955

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida KG-4 contig00015, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ATCAAGCTGGCAGTGTTCGACGTGGACGGCGTGCTCACCGACGGGCGCCTGTACTTCCTAGAGGACGGCAGCGAGTTCAAGACGTTCAATACCCTCGACG GCCAGGGCATCAAGATGCTCATGGCCTCGGGCGTGACCACCGCGATCATCAGCGGGCGCAAGACCCCGGTGGTCGAGCGCCGGGCGAAGAACCTCGGTAT CCCGCACCTGTACCAGGGCCGCGAGGACAAACTGGTGGTGCTGGACGGCCTGCTCGCCGAACTGGGCCTGAGCTATGCTCAAGTGGCCTACCTTGGCGAC GACCTGCCCGACCTGCCGGTAATCCGCCGCGTGGCCCTGGGCATGGCGGTCGCCAACGCAGCGCCGTTCGTGCGCCAACACGCCCATGGCGTGACCCAGG CACGTGGCGGCGAAGGCGCGGCCCGTGAATTCTGCGAACTGATCATGCAGGCCCAGGGCACCCTGGACGCTGCCAACGCCAACTACCTGTAAGGCTGCCC
DNA Sequence for Gene
>V520_RS15955
ATGTTCAGCAAGAAAGCCCGCAACATTGCGCTGCTCGCGGTAATCGCCGCCCTGCTGGTGGCGATCGGCTACTGGAATGTCAGCCCGGAAAGCTTCCTCG ACAAGCCGGTGGCCCAGGTCGACGAAAGCGCCATCGACTACTACGCGGTCAACGCTCACAGCCTGCAGTTCCTGCCCGATGGCAAGCTGCAGTACGAAAT GACTGCCGACAAGGTCGAACACCTCAAGGCCAGCGAAATCACCCTGCTGACCACGCCGGACCTGCACCTTTACCGCGGTACCGAATACCCCTGGCACGTA CAGAGCACCCGCGCCGAAGTCAACCCGGACGGCAGCGAGGTCGAACTGATCGACAACGTACGGGTCGCCCGCACCGACGAAAAGCAGCGCGAAATGATCA TTACCAGCTCACGCATGACCGTGTTCCCGCAGAAGCAATATGCGCAGACCGAGCAAGCCGTTAGAATCGACGGCGCCGGTGGCACAACTACGGGCAAAGG AATGAAAGCGTATTTGAAAGAAGGCAAGATGGACTTGCTCTCTAACGTAAGAGGACAGTATGAGGCTCGTTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AACCCTCCCCCTTTTGCTCAGCCTGAGCGCAGCACTGGGAAGCGCGAGCGCCCTCGCCCTGCCGAACGACCGTGACCAGCCTATCCGCATCCAGGCCGAC AACGCCCACCTGGACGACAAGCAGGGCGTGGCCACCTACACCGGCGACGTGATCATCACCCAGGGTTCGATGATGATCAAAGGCAACACCGTGACCATCA CCCGCTCCGCCTCCGGCGACATCGACGTGGTGACCTCGGTGGGCAACCTGGCCTACTTCGAGCAGCAGCAGAGCGCAGCCAAACCGGACAAGATGAAAGG CTGGGCGGTGACCATCCAGTACCAGTCGCAGAAGGACATGGTGATCCTCACCGACCGCGCCAAGGTCGAGAACGAAGGCAACACCACCGAAGGCGAGAAG ATCGTCTACAACACCCAGACCCAGGTGGCAACCGCCGGTCGCGGTGGCAACGTGACCTCGCCGCGTCAGCGCATCGACATGGTGATCCAGCCCAAGAAGA
Amino Acid Sequence
>LPS ABC transporter permease
MFSKKARNIALLAVIAALLVAIGYWNVSPESFLDKPVAQVDESAIDYYAVNAHSLQFLPDGKLQYEMTADKVEHLKASEITLLTTPDLHLYRGTEYPWHV QSTRAEVNPDGSEVELIDNVRVARTDEKQREMIITSSRMTVFPQKQYAQTEQAVRIDGAGGTTTGKGMKAYLKEGKMDLLSNVRGQYEAR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site