Pseudomonas putida KG-4, V520_RS15825

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida KG-4 contig00014, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCTGGAAAATGCCTGGCCGGCGATAAAACCCTTGCTCTGATGCTTTAAACGGCGCCGTCTTTCGGCTAATGTTGCGCCCCCCGTTTCGAGTGCCACCAAT GCCGCGCCCTGCCTGGTCCCTTTATGCCTACCAACTGATCGAGCCTGATGAGCAGCTCGACCTGTTCGCCTGCCAGGAAATCCGCGTCCACCTCGTGGCC CGACAGCTCGAGCTGGGCGTACCGGCCGACCGCACTCTGTGCGGTGGCCTGCTGCCTGCGCAACCGCGCTGGTCGGGGGTACCGCGCTCGATCTACCGCG ACGGCCGCCTGTGCGACCTGTGCCGCGCGATCCTCGATGCCCAGCGGCGCGGCATGCGCCCGGTGTGGCCGGAGCTGCAGGGCGGCTGAACACCGCACCT TTCATCATCTGGAACGCTTGCATGGCGCCAATGCCTCCCGCTTGCATCGGCGCAGGTGTACAATCGATTCTCTTGACCCACCTTTCGAAGGATTTACCGG
DNA Sequence for Gene
>V520_RS15825
ATGTTGCCGCGCTTTCCTGCCGTCACCCGTAGCCTGTCCCTGGCCGCCCTGCTGGTAGCAGGCCCCGCTGCTGCGCTGGAGCTGCCATTGCCACCACCCG GTGAAGACATCATCGGCCAGGTGCATGTGATCAAGGCAAAGTACGAGGACACGTTCGCCGATATCGGCACCGCCAACGACCTCGGCTACCTGGAAATGAT CGCCGCCAACCCGGGCGTGGATCCATGGCTGCCAGGTGCCGGCACCGAGATCATCCTGCCGACCCGCTACATCCTGCCGCCGGGCCCGCGTGAGGGCATC GTCATCAACCTGGCCGAATACCGCATGTACTACTTCCCGAAAGGGCAGAACGTGGTGCATACCTTCCCTCTGGGTATTGGCCGTGAAGGCTGGGGTTCGC CGATCGCCAATACCAAGATCACCGCCAAGACGCCGAACCCGACCTGGACCCCTCCAGCGTCGATCCGTGCCGAGCACGCGGCTGACGGTGACATCCTGCC GAGCGTGGTGCCGGCCGGCCCGGACAACCCGCTGGGGCCGTTCAAGTTCACCCTCGGCGTACCGGGTTACCTGATTCATGGTTCGAACAAGAAATTCGGC ATTGGCATGCGTACCAGTCACGGTTGCTTCCGCATGCTCAACAACAACGTGCTGGAACTGTCGAAGATGGTGCCGGTGGGTACGCCGGTGCGCATCATCA ATGAGCCCTACAAGTTCGGTATCAGTGGCGGAAAGGTCTATCTGGAGGCGCACACGCCGTTGGACGACCAGGGTAATCCGTCGGTGGTCGATAAACACAC TGCTGTTATCAACGCCTTGCTCAAGCGTGAAGACCTGGCAAATAACCTACGCATGAACTGGGACATGGTGCGTGACGTGGTGGCCGCGGAAGATGGCATG CCTGTGGAAATTGCCGTGCCGGCCGAAAGCCAGGGTGGGGCACCGATGGTTTCGAGCATTCCGCCCGAACTGCAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGTAATTGCGACACACCCGGGCCTGCCTTAGTGCAGGCCTTTTCGTTTCTGCCAGGCGCGTTTGCTTGTGTACCGGCAATAAAAAAGCCGACCCACAAGT GGGTCGGCTCCATAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTCCAGCATACGCAGAGCGCGCTCGTTGGCTTCGTCAGCGGTCTGCTGAGC CTTCTGAGCGGCTGCCAGTGCGTCGTCAGCCTTACGGTAGGCTTCGTCTGCACGAGCTTGAGCGCGAGCTGCTGCGTCTTCAGTCGCAGTCAGACGAGCT TCGGTTTCTTTGGATACGCTGCTGCAACCGGTAGCCAGAACTGCGGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCGTGTTCCCCTTCAAGG ACTTTCTATTAAATAGCCATCTCTCGGAAAAGAGAAACTGGCCGGCGTACATAGTACCCATTACTTGTAGTAAGTAAACTGACTAAGCGCAAGAACTGCA
Amino Acid Sequence
>transpeptidase
MLPRFPAVTRSLSLAALLVAGPAAALELPLPPPGEDIIGQVHVIKAKYEDTFADIGTANDLGYLEMIAANPGVDPWLPGAGTEIILPTRYILPPGPREGI VINLAEYRMYYFPKGQNVVHTFPLGIGREGWGSPIANTKITAKTPNPTWTPPASIRAEHAADGDILPSVVPAGPDNPLGPFKFTLGVPGYLIHGSNKKFG IGMRTSHGCFRMLNNNVLELSKMVPVGTPVRIINEPYKFGISGGKVYLEAHTPLDDQGNPSVVDKHTAVINALLKREDLANNLRMNWDMVRDVVAAEDGM PVEIAVPAESQGGAPMVSSIPPELQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site