Strain | Pseudomonas putida KG-4 contig00013, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GAGGCGACCCGCTCGATAATCGATTACCTGGCCTTTGCCCGGGCGTTCAACCAAGGCTTCCCTGGTTTCGTCGCCGACGTGCACGGCCTGCAGAACGAAA GCGGCTGTTACACGGTGGATTGCATCAAGGAATGCGAATGATCTCGACGCCGCTGCGCGCCAGTTCGAAGCGGTTTTCACCCAGGTGGTTGACCTTGTCG CCGATGGCCAGGCGATAGGTGGTGATGGGGGCGCCCAGCGTGCTGCCGTCGGTTTGCAGGGTCGACTCCTGGAACTCGTGCACGGGGTAGATGCGGCCTT CGGCGTCACGGGCGTGGAATTGGCCGACCATTACTGCTGCCATTTGGGTGGAAACCTCTGAATTACGTGGGAAATGTCTGCAGGCATAGACCGTGGAACA GCGTCGGAAGTTTTCGCCCCGCGGAAAAAAAACCAAAGCGCCGAGGAACGGTCATCTATAACTACAACGTCCCTTTACCCAGCAGAGGTTGGAAATTGCC
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DNA Sequence for Gene |
>V520_RS14850
ATGAGCCAGGTGTATTCGGTAGCAGTGGTCGTCGGTAGCTTGCGCAAGGAGTCCTACAACCGCAAGATCGCCCGCGCACTCTCAGAGCTGGCGCCGTCCA GCCTTGCCCTGAAGATCGTCGAGATTGGCGATTTGCCGTTGTACAACGAGGATGTCGAGGCCGAAGCGCCGCCGCAAGCGTGGAAGCGTTTTCGCGACGA GATCCGCCGTAGCGATGCGGTGCTGTTCGTCACCCCGGAGTACAACCGCTCGGTGCCTGGCGGCCTGAAGAATGCCATCGATGTGGGCTCGCGGCCCTAC GGGCAAAGCGCCTGGAGTGGCAAGCCGACGGCGGTGGTCAGTGTGTCGCCGGGGGCCATTGGTGGCTTTGGCGCCAACCATGCCGTGCGCCAGTCGCTGG TGTTTCTGGACATGCCGTGCATGCAGATGCCCGAGGCCTACATCGGTGGCGCGGCTAGTCTGTTCGACGATGCGGGCAAGCTCAGTGACAAGACTCGGCC GTTCTTGCAGGCGTTTATCGACAAGTTCGCTTCCTGGGTGAAGTTGAACAGGGCGGTTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGCCTGTTCATTCGGTGTCAGCTTTCAAAAGGGGCTGCTGCGCAGCCCATCGCCGGCAAGCCAGCTCCCACACCGACCGGGTTGGCTCTGGAGATTTGCT TCTTCAGGAAATTCACATGGATTGAGAACGATGCGGTCGGTGTGGGAGCTGGCTTGCCGGCGATGGGCCGCGCAGCGGCCCCCAGCGGACTAGCGGAAGC TGTAGGAAACCCCGGCATACACGCCAAAGCCTTCGCCCGGGGTCGAACGGGCCTCATCCTTTCCTGCATCGTTGTAGCCAGGTGTCACCGTCGCCGCATA ACGCTTGTTGGTGAGGTTGCGCAGGTCCAGCCAGGTCTGCCAGTCCTGCTTCGGTGAGTCCCAGCCCAGGCGTGCGCCGAGCAAGGCATATTCATCGGCG TGGTAACTATTGGCGTAGTCCACCTGCACCTTCGACGCCATCTGCGTGTTCACCCCTGCATAGAAGCCGTTCGGCCAGTCATAGCGCAGCTCGGCCTGGT
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Amino Acid Sequence |
>ACP phosphodiesterase
MSQVYSVAVVVGSLRKESYNRKIARALSELAPSSLALKIVEIGDLPLYNEDVEAEAPPQAWKRFRDEIRRSDAVLFVTPEYNRSVPGGLKNAIDVGSRPY GQSAWSGKPTAVVSVSPGAIGGFGANHAVRQSLVFLDMPCMQMPEAYIGGAASLFDDAGKLSDKTRPFLQAFIDKFASWVKLNRAV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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