Pseudomonas putida KG-4, V520_RS14110

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR30024 ALIPHATIC SULFONATES-BINDING PROTEIN-RELATED - - 22 379 4.4E-48
Gene3D G3DSA:3.40.190.10 - - - 145 377 3.9E-34
Pfam PF13379 NMT1-like family - - 40 280 1.2E-46
Gene3D G3DSA:3.40.190.10 - - - 42 132 1.6E-19
SUPERFAMILY SSF53213 LigB-like - - 246 362 1.41E-6
Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal 11 32 4.7E-6
NCBIfam TIGR01409 JCVI: twin-arginine translocation signal domain IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal 11 29 0.0012
CDD cd13553 PBP2_NrtA_CpmA_like IPR044527 Nitrate/bicarbonate ABC transporter substrate-binding domain 45 265 1.79416E-90
SUPERFAMILY SSF53850 Periplasmic binding protein-like II - - 44 277 1.32E-37

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.