Pseudomonas putida KG-4, V520_RS13175
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida KG-4 contig00010, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TACTTCCAGCAGGTAGGCGGCATCGAGTGCTACCCGGTCACCGGTGAAATCACCTACGGCCTGGAGCGCCTGGCCATGTACATCCAGGGCGTCGACTCGG TGTACGACCTGGTGTGGGCCGACGGCCCGTTCGGCAAGGTCACCTATGGCGACGTGTTCCACCAGAATGAGGTGGAGCAGTCGACCTACAACTTCGAGCA CGCCAACGTCGAGAAGCTGTTCGAGCTGTTCGACTTCTACGAAAGCGAAGCCAACCGCCTGATCAAGCTTGAGCTGCCGCTGCCGACCTATGAAATGGTG CTGAAGGCCTCGCATACCTTCAACCTGCTGGACGCCCGCCGTGCCATCTCGGTAACCGAGCGCCAGCGCTACATCCTGCGTGTACGTACCCTGGCCCGGG ACGTGGCGCAAAGCTATCTGCAAGCCCGCGCACGCCTGGGCTTCCCGATGGCCACCCCTGAACTGCGTGACGAAGTGTTGGCTAAGCTGGAGGCTGCACA
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| DNA Sequence for Gene |
>V520_RS13175
ATGAGTGCTCAAGATTTCCTGGTAGAACTGGGCACCGAAGAGCTGCCACCGAAGGCCCTCGCCAGCCTCGGCGAAGCCTTCCTGGCTGGTATCGAGAAAG GCCTGCAGGCCGCTGGCCTGAACTACACCGGCAAGCAGGTTTACGCCGCGCCGCGTCGCCTGGCCGTACTGATTCGCCAACTGGACGTGCAGCAGCCTGA CCGCAGCATCAATATCGACGGCCCGCCCCTGCAGGCTGCTTTCAAAGACGGCGAACCGACCCAGGCTGCCTTGGGCTTTGCCAAGAAATGCGGTGTGGAG CTGTCGGAAATCGACCAGACCGGCGCCAAGCTGCGCTTCTCCCAGCACATCCCGGGCAAGGCCACCACCGGCCTGCTGCCGACTATCGTCGAAGATTCGC TCAACGACCTGCCGATTCCCAAGCGCATGCGCTGGGCGGCCAGCCGTGAAGAGTTCGTGCGCCCGACCCAATGGCTGGTGATGCTGCTGGGCGACCAGGT GGTCGACTGCACCATCCTGTCGCAGAAGGCCGGCCGTGAATCCCGTGGCCACCGCTTCCACCACCCGCAAAACGTGGTCATCACCACCCCGGCCAACTAC GTCGAAGACCTGCGCAAAGCGTACGTGCTGGCCGACTTCGCAGAGCGCCGCGAGCTGATCAGCAAGCGTACCGCTGAACTGGCCATGCAGCAGGAAGGCA GCGCCATCGTGCCGCCGGCGCTGCTGGACGAAGTGACCGCCCTGGTCGAATGGCCGGTGCCGCTGGTGTGCTCGTTCGAGGAGCGTTTCCTCGAAGTGCC GCAGGAAGCCCTGATCACCACAATGCAGGACAACCAGAAGTACTTCTGCCTGCTGGACAGCGAAGGCAAGCTGCTGCCGCGCTTCATCACCGTGGCCAAC GTCGAGAGCCGCGACCCGAAGCAGATCGTGCAAGGCAACGAGAAGGTCGTGCGCCCACGCCTGACCGATGCCGAGTTCTTCTTCAAGCAGGACAAGAAGC AGCCGCTGGAAACCTTCAACGAGCGCCTGAAGAACGTGGTGTTCCAGGCTCAACTGGGTACCGTGTACGACAAGGCCGAGCGCGTTTCCAGGCTGGCCGC CTTCATCGCCCCGCTGATCGGCGGCGACGCCCAGCGCGCAGGCCGTGCGGGCCTGCTGTCGAAGTGCGACCTGGCCACCGAGATGGTCGGCGAATTCCCT GAAATGCAGGGTGTTGCCGGTTACTACTACGCGCTCAACGACGGTGAGCCGGAAGACGTTGCCCTTGCCCTGAACGAGCAGTACATGCCGCGCGGTGCTG GCGCCGAGCTGCCGCAGACCCTCACCGGTGCTGCCGTGGCCATCGCCGACAAGCTCGACACCTTGGTCGGCATCTTCGGCATCGGCATGCTGCCTACCGG CAGCAAAGACCCGTACGCCCTGCGCCGTGCCGCACTGGGCGTGCTGCGTATCTTGATCGAGAAGCAGCTGGACCTGGACCTGACCGGTGCGGTCGAGTTC GCGGTCAAGCAGTTCGGCGCCAAGGTCAAGGCCGCCGGCCTGGCCGAACAGGTGCTGGAGTTCATCTTCGACCGCCTGCGTGCGCGTTACGAAGACGAAG GCATCGATGTGGCCACCTACCTGTCGGTACGTGCCCTGCAGCCAGGTTCTGCCCTGGACTTCGACCAGCGCGTGCAGGCTGTACAAGCCTTCCGCAAGCT GCCGGAAGCCGAGGCTCTGGCCGCAGTGAACAAGCGCGTGTCGAACCTGCTGAGCAAGGCCGAAGGCGCCATCGCCGATCATGTCGAGCCGAAGTACTTC GACAACGCCAACGAGTTCTCCCTGTACTCGGCCATCCAGCAGGCCGACCAGGCCGTGCAACCCATGGCTGCTGCACGCCAGTACAGCGAGGCGCTGGCCC GCCTGGCGGCCCTGCGTGACCCGGTCGACGCCTTCTTCGAGGCAGTGATGGTCAACGCCGAGGACGCCAAGGTACGCGCCAATCGTTATGCCCTACTCAG CCGCCTGCGCGGCCTGTTCTTGGGCGTGGCCGACATTTCGCTGCTGGGGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCTTGAAACTGCTGATTCTCGACCGTGACGGAGTCATCAACCACGACTCCGACGCCTACATCAAGACGCTGGACGAGTGGGTGCCGATCCCTGGCTCGG TCGAAGCGATCGCGCAGTTGAGCAAGGCGGGCTGGACGGTGGCCGTTGCCACCAACCAGTCCGGCATTGCCCGTGGCTACTATGCGCTGGCCACCCTCGA GGCCATGCACGCGCGCCTGCGCGCGCTGGTGGCCGAGCAGGGTGGCGAGGTGGGCCACATCGTGTATTGCCCGCACGGGCCGGACGAAGGCTGCGATTGC CGCAAGCCCAAGCCTGGCATGCTGCGGGCGATCGCCGAACATTACCAGGTCGACCTGGAAGGCGTCTGGTTCGTTGGTGACAGCAAAGGTGACCTGGAGG CCGCCCTGGCCGTCGGTGCACAACCCGTGCTGGTGAAAACCGGCAAGGGCGAGCGGACCCTGGAAAAAGGCGTCCCGGAAACTACACTGATTTTCGACGA
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| Amino Acid Sequence |
>glycine-tRNA synthetase subunit beta
MSAQDFLVELGTEELPPKALASLGEAFLAGIEKGLQAAGLNYTGKQVYAAPRRLAVLIRQLDVQQPDRSINIDGPPLQAAFKDGEPTQAALGFAKKCGVE LSEIDQTGAKLRFSQHIPGKATTGLLPTIVEDSLNDLPIPKRMRWAASREEFVRPTQWLVMLLGDQVVDCTILSQKAGRESRGHRFHHPQNVVITTPANY VEDLRKAYVLADFAERRELISKRTAELAMQQEGSAIVPPALLDEVTALVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFCLLDSEGKLLPRFITVAN VESRDPKQIVQGNEKVVRPRLTDAEFFFKQDKKQPLETFNERLKNVVFQAQLGTVYDKAERVSRLAAFIAPLIGGDAQRAGRAGLLSKCDLATEMVGEFP EMQGVAGYYYALNDGEPEDVALALNEQYMPRGAGAELPQTLTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKQLDLDLTGAVEF AVKQFGAKVKAAGLAEQVLEFIFDRLRARYEDEGIDVATYLSVRALQPGSALDFDQRVQAVQAFRKLPEAEALAAVNKRVSNLLSKAEGAIADHVEPKYF DNANEFSLYSAIQQADQAVQPMAAARQYSEALARLAALRDPVDAFFEAVMVNAEDAKVRANRYALLSRLRGLFLGVADISLLG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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